Resources

2. Chi-hua Chiu, Chris Amemiya, Ken Dewar, Chang-Bae Kim, Frank Ruddle and Gunter P. Wagner 2002: Molecular evolution of HoxA cluster in the three major gnathostome lineages. PNAS 99:5492-5497. [download word file] This memo summarizes the findings about conserved non-coding sequences of AbdB like genes from the HoxA cluster of shark, human and zebra fish. It is supplementary material to the paper.
1. Chiu, C.-H., D. Nonaka, L. Xue, C. T. Amemiya and G. P. Wagner, 2000 Evolution of Hoxa-11 in lineages phylogenetically positioned along the fin-limb transition. Mol. Phylogen. Evol. 17: 305-316.The files below contain the amino acid alignments of Hoxa-11 which are the basis for the results presented in Chiu et al. 2000. The file names with suffix .mv are MacVector files. The files are [coming soon]:

  • AllA11.Aligned.mv Mac Vector file of the alignment of the full amino acid sequences.
  • A11AACUT Aligned.txt text file with the alignment of the Hoxa-11 amino acid sequences excluding ambiguous segments of the alignment.
  • A11AACUT Aligned.pict picture format of the alignment of the Hoxa-11 amino acid sequences excluding ambiguous segments of the alignment.
  • A11AACUT Alinged.mv MacVector file of the alignment of the Hoxa-11 amino acid sequences excluding ambiguous segments of the alignment.
  • A11rootedCUT.txt text file of the alignment of the Hoxa-11 amino acid sequences excluding ambiguous segments of the alignment and including Hoxd-11 from mouse as an outgroup.
  • A11rootedAACUT.pict picture file of the alignment of the Hoxa-11 amino acid sequences excluding ambiguous segments of the alignment and including Hoxd-11 from mouse as an outgroup.
Skip to toolbar