Selected refereed peer-reviewed articles (h-index=15; i10-index=20; Google Scholar Citations=>5000 [01/05/2023]), n=110, Alper-Doger (AD) Scientific Index.
2024 *+++++Global Burden of Disease Study Collaborator:
- **IgM N-glycosylation correlates with COVID-19 severity and rate of complement deposition, Publication: Nature Communications, Publication date: January 9, 2024, collaboration with Dr. Steven. Kleinstein, Yale University, New Haven, Connecticut, USA
Dr. Leying, Yale University, New Haven, Connecticut, USA Dr. Arce, Dr. Kho, Harvard University, Cambridge, MA, USA. Al Ozonoff, Florian Krammer, Ruth R. Montgomery, Ofer Levy, Bjoern Peters, Patrice M. Beckerr, Nadine Rouphael, et. al. (Cited by 10)^ DOI: https://doi.org/10.21203/rs.3.rs-2939468/v1, Volume: 15, Issue, Pages: 404 - **Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study, Publication: Nature Communications, Publication date: January 9, 2024, collaboration with Dr. Steven. Kleinstein, Yale University, New Haven, Connecticut, USA Dr. Leying, Yale University, New Haven, Connecticut, USA Dr. Arce, Dr. Kho, Harvard University, Cambridge, MA, USA. Al Ozonoff, Florian Krammer, Ruth R. Montgomery, Ofer Levy, Bjoern Peters, Patrice M. Beckerr, Nadine Rouphael, et. al. (Cited by 10)^ DOI: 10.1038/s41467-023-44090-5, Volume: 1, Issue: 15, Pages: 216.
- **Integrated longitudinal multi-omics study identifies immune programs associated with COVID-19 severity and mortality in 1152 hospitalized participants, Publication: bioRxiv, Publication date: January 9, 2024, collaboration with Dr. Steven. Kleinstein, Yale University, New Haven, Connecticut, USA, Dr. Leying, Yale University, New Haven, Connecticut, USA, Dr. Arce, Dr. Kho, Harvard University, Cambridge, MA, USA. Al Ozonoff, Florian Krammer, Ruth R. Montgomery, Ofer Levy, Bjoern Peters, Patrice M. Beckerr, Nadine Rouphael, et. al. (Cited by 10)^DOI: https://doi.org/10.21203/rs.3.rs-2939468/v1, Volume: 15, Issue, Pages: 404.
- **Relationship of Heterologous Virus Responses and Outcomes in Hospitalized COVID-19 Patients, Publication: The Journal of Immunology, Publication date: January 9, 2024, collaboration with Dr. Steven. Kleinstein, Yale University, New Haven, Connecticut, USA Dr. Leying, Yale University, New Haven, Connecticut, USA Dr. Arce, Dr. Kho, Harvard University, Cambridge, MA, USA^ Al Ozonoff, Florian Krammer, Ruth R. Montgomery, Ofer Levy, Bjoern Peters, Patrice M. Beckerr, Nadine Rouphael, et. al. DOI: 10.4049/jimmunol.2300391., Volume: 8, Issue: 211, Pages: p1224-1231.
- *Global, regional, and national burden of neck pain, 1990–2020, and projections to 2050: a systematic analysis of the Global Burden of Disease Study 2021, Publication: The Lancet Rheumatology, Publication date: February 23, 2024, GBD 2021 Neck Pain Collaborators, (Cited by 10)^ DOI: https://doi.org/10.1016/S2665-9913(23)00321-1., Volume: 3, Issue: 6, Pages: e142-e155.
- *Global age-sex-specific mortality, life expectancy, and population estimates in 204 countries and territories and 811 subnational locations, 1950–2021, and the impact of the COVID-19 pandemic: a comprehensive demographic analysis for the Global Burden of Disease Study 2021, Publication: The Lancet, Publication date: March 27, 2024, GBD 2021 Demographics Collaborators, (Cited by 33)^ DOI: https://doi.org/10.1016/S0140-6736(24)00476-8., Volume: 10440, Issue: 403, Pages: P1989-2056.
- *Global, regional, and national burden of disorders affecting the nervous system, 1990–2021: a systematic analysis for the Global Burden of Disease Study 2021, Publication: The Lancet Neurology, Publication date: March 27, 2024, GBD 2021 Nervous System Disorders Collaborators, (Cited by 30)^DOI: https://doi.org/10.1016/S1474-4422(24)00038-3., Volume: 4, Issue: 23, Pages: P344-381.
- *Global, regional, and national age-specific progress towards the 2020 milestones of the WHO End TB Strategy: a systematic analysis for the Global Burden of Disease Study 2021. The Lancet Infectious Diseases, Publication date: March 27, 2024, GBD 2021 Tuberculosis Collaborators,(Cited by 10)^ DOI: https://doi.org/10.1016/S1473-3099(24)00007-0, Volume: 7, Issue: 24, Pages: p698-725.
- *Global incidence, prevalence, years lived with disability (YLDs), disability-adjusted life-years (DALYs), and healthy life expectancy (HALE) for 371 diseases and injuries in 204 countries and territories and 811 subnational locations, 1990–2021: a systematic analysis for the Global Burden of Disease Study 2021, Publication: The Lancet, Publication date: April 19, 2024, GBD 2021 Diseases and Injuries Collaborators, (Cited by 10)^ DOI: https://doi.org/10.1016/S0140-6736(24)00757-8, Volume: 10440, Issue: 403, Pages: p2133-2161.
- A supervised bayesian factor model for the identification of multi-omics signatures, Publication: Oxford Bioinformatics, IF=4.4, Publication date: April 23, 2024, collaboration with Dr. Steven. Kleinstein, Yale University, New Haven, Connecticut, USA, Jeremy P Gygi, Anna Konstorum, Shrikant Pawar, Edel Aron, Steven Kleinstein, & Leying Guan., Dr. Leying, Yale University, New Haven, Connecticut, USA, Dr. Konstorum, Institute for Defense Analyses^ DOI: https://doi.org/10.1093/bioinformatics/btae202, Volume: 5, Issue: 40, Pages: btae202.
- *Global, regional, and national burden of gout, 1990–2020, and projections to 2050: a systematic analysis of the Global Burden of Disease Study 2021, Publication: The Lancet Rheumatology, Publication date: July 1, 2024^, GBD 2021 Gout Collaborators,
DOI: https://doi.org/10.1007/978-981-99-8031-4_3, Volume: 812, Issue, Pages: pp 21–31. - Stroke Risk Stratification Using Neural Networks, Publication: Springer Lecture Notes in Networks and Systems, Publication date: March 27, 2024, (Claflin University, Orangeburg, South Carolina, USA, Summer Seed Research Grant Funded), Presentation video, Springer^^ [**2023:36], 1, 2, 3, 4, 5, 6.†

Award Number: 2242812, Award/Fund Agency Code: 4900, Program Element/Reference Code’s (PEC/Congressional District): 193Y00, 075Z/7715/8037/9150/SMET/03, Assistance Listing Number: 47.083, (Direct costs, Effort=100%) Presentation video [**2024:40],


2023 **IMMuno Phenotyping Assessment in a COVID-19 Cohort (IMPACC) Network:
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Neural Networks for Predicting Severity of Ovarian Carcinomas, Publication: Springer Lecture Notes in Networks and Systems, Publication date: January 1, 2023, Github collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia^^ [**2022:26], 1, 2, 3, 4. DOI: http://dx.doi.org/10.1007/978-981-19-7660-5_7, Volume, Issue, Pages.†
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*Global investments in pandemic preparedness and COVID-19: development assistance and domestic spending on health between 1990 and 2026, Publication: The Lancet Global Health, Publication date: January 23, 2023, Global Burden of Disease 2021 Health Financing Collaborator Network, (Cited by 136)^ DOI: https://doi.org/10.1016/S2214-109X(23)00007-4, Volume: 3, Issue: 11, Pages: e385 – e413.
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SPEAR: a Sparse Supervised Bayesian Factor Model for Multi-omic Integration, Publication: bioRxiv, Publication date: January 28, 2023, Jeremy P Gygi, Anna Konstorum, Shrikant Pawar, Edel Aron, Steven Kleinstein, & Leying Guan., collaboration with Dr. Steven. Kleinstein, Yale University, New Haven, Connecticut, USA Dr. Leying, Yale University, New Haven, Connecticut, USA, Dr. Konstorum, Institute for Defense Analyses (Cited by 10)^ DOI: https://doi.org/10.1101/2023.01.25.525545, Volume, Issue, Pages.††††
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K-fold Semi-supervised Self-learning Technique for Image Disease Localization, Publication: Springer Advances in Intelligent Systems and Computing, Publication date: April 10, 2023, Video App Product, Presentation video, collaboration with Patil A., Chopade, presently with ChestAi, https://www.chestai.org/,Dr. Stanam, University of Iowa, Iowa City, USA, Git, Indian Institute of Technology, Kharagpur. (Cited by 10)^^ [**2022:31], DOI: http://dx.doi.org/10.1007/978-981-19-9819-5_49, Volume, Issue, Pages.†
- *Global, regional, and national burden of low back pain, 1990–2020, its attributable risk factors, and projections to 2050: a systematic analysis of the Global Burden of Disease Study 2021, Publication: The Lancet Rheumatology, Publication Date: May 23, 2023, GBD 2021 Low Back Pain Collaborators, (Cited by 253)^ DOI: https://doi.org/10.1016/S2665-9913(23)00098-X, Volume: 6, Issue: 5, Pages: e316-e329.
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Potential use of endemic human coronaviruses to stimulate immunity against pathogenic SARS-CoV-2 and its variants, Publication: Taylor & Fancis Libyan Journal of Medicine, Publication date: May 16, 2023, Git, Narges S. Shamabadi, Anisah B. Bagasra, Shrikant Pawar & Omar Bagasra, Impact Factor (IF)=2.2.
collaboration with Dr. Omar. Bagasra, Claflin University, Orangeburg, South Carolina, USA. (Cited by 10)^^ DOI: https://doi.org/10.1080/19932820.2023.2209949, Volume: 18, Issue: 1, Pages.†††
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**Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients, Publication: Cell Reports Medicine ,Publication date: May 27, 2023, IF=17, collaboration with Dr. Steven. Kleinstein, Yale University, New Haven, Connecticut, USA Dr. Leying, Yale University, New Haven, Connecticut, USA Dr. Arce, Dr. Kho, Harvard University, Cambridge, MA, USA. Al Ozonoff, Florian Krammer, Ruth R. Montgomery, Ofer Levy, Bjoern Peters, Patrice M. Beckerr, Nadine Rouphael, et. al. (Cited by 14) News^ DOI: https://doi.org/10.1016/j.xcrm.2023.101079, Volume: 6, Issue: 4, Pages: 101079.
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*Global, regional, and national prevalence and mortality burden of sickle cell disease, 2000–2021: a systematic analysis from the Global Burden of Disease Study 2021, Publication: The Lancet Hematology, Publication date: June 16, 2023, GBD 2021 Sickle Cell Disease Collaborators, (Cited by 102)^ DOI: https://doi.org/10.1016/S2352-3026(23)00118-7, Volume: 8, Issue: 10, Pages: e585-e599.
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Cyclical Learning Rates (CLR’S) for Improving Training Accuracies and Lowering Computational Cost, Publication date: July 3, 2023, Publication: Springer Lecture Notes in Computer Science, App Product Poster GitHub (National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), RII Track-1 award funded project, Grant/award/project title: “AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina (ADAPT)”) Git, Presentation, Role: Co-PI, NSF Identifier: 000879633, (August 1, 2023- August 31, 2027) (Direct costs, Effort=100%), Award Number: 2242812, Award/Fund Agency Code: 4900, Program Element/Reference Code’s (PEC/Congressional District): 193Y00, 075Z/7715/8037/9150/SMET/03, Assistance Listing Number: 47.083, collaboration with, Chopade, presently with ChestAi, https://www.chestai.org/, Dr. Narayanan, Johnson & Johnson, Pennsylvania, USA, Indian Institute of Technology, Kharagpur^^ [**2023:32, 38, 42], 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12 ,13, 14, 15, CLR-Article
DOI: https://doi.org/10.1007/978-3-031-34960-7_23, Volume: 13920, Issue, Pages.†
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*Global, regional, and national burden of meningitis and its aetiologies, 1990–2019: a systematic analysis for the Global Burden of Disease Study 2019, Publication: The Lancet Neurology, Publication date: July 21, 2023, GBD 2019 Meningitis Antimicrobial Resistance Collaborators, (Cited by 29)^ DOI: https://doi.org/10.1016/S1474-4422(23)00195-3, Volume: 8, Issue: 22, Pages: p685-711.
- *Prevalence, years lived with disability, and trends in anaemia burden by severity and cause, 1990–2021: findings from the Global Burden of Disease Study 2021, Publication: The Lancet Hematology, Publication date: July 31, 2023, GBD 2021 Anaemia Collaborators, (Cited by 64)^ DOI: https://doi.org/10.1016/S2352-3026(23)00160-6, Volume: 9, Issue: 10, Pages: e713-e734.
- *The burden of antimicrobial resistance in the Americas in 2019: a cross-country systematic analysis, Publication: The Lancet Regional Health, Publication date: August 9 2023, Antimicrobial Resistance Collaborators, (Cited by 29)^ DOI: https://doi.org/10.1016/j.lana.2023.100561, Volume: 25, Issue, Pages: 100561.
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*Global, regional, and national burden of osteoarthritis, 1990–2020 and projections to 2050: a systematic analysis for the Global Burden of Disease Study 2021, Publication: The Lancet Rheumatology, Publication date: August 22, 2023, GBD 2021 Osteoarthritis Collaborators, (Cited by 136)^ DOI: https://doi.org/10.1016/S2665-9913(23)00163-7, Volume: 9, Issue: 5, Pages: e508-e522.
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*Global, regional, and national incidence of six major immune-mediated inflammatory diseases: findings from the global burden of disease study 2019, Publication: The Lancet Discovery Science: eClinicalMedicine, Publication date; September 8, 2023, GBD 2019 IMID Collaborators, (Cited by 12)^ DOI: https://doi.org/10.1016/j.eclinm.2023.102193, Volume: 64, Issue, Pages: 102193.
- *Hearing Loss Prevalence, Years Lived With Disability, and Hearing Aid Use in the United States From 1990 to 2019: Findings From the Global Burden of Disease Study, Publication: Lippincott Williams & Wilkins (LWW) Ear & Hearing, Publication date: September 19, 2023, IF=3.64 (Cited by 10)^ DOI: https://doi.org/10.1016/S2665-9913(23)00211-4, Volume: 10, Issue: 5, Pages: e594-e610.
- *Global, regional, and national burden of rheumatoid arthritis, 1990–2020, and projections to 2050: a systematic analysis of the Global Burden of Disease Study 2021, Publication: The Lancet Rheumatology, Publication date: September 25, 2023, GBD 2021 Rheumatoid Arthritis Collaborators, (Cited by 42)^ DOI: https://doi.org/10.1016/S2468-2667(23)00185-8, Volume: 11, Issue: 8, Pages: e839-e849.
- *Global, regional, and national mortality due to unintentional carbon monoxide poisoning, 2000–2021: results from the Global Burden of Disease Study 2021, Publication: The Lancet Public Health, Publication date: October 7, 2023, GBD 2021 Carbon Monoxide Poisoning Collaborators, (Cited by 10)^ DOI: https://doi.org/10.1016/S1474-4422(23)00287-9, Volume: 11, Issue: 12, Pages: p1026-1047.
- *Global, regional, and national burden of spinal cord injury, 1990–2019: a systematic analysis for the Global Burden of Disease Study 2019, Publication: The Lancet Neurology, Publication date: October 20, 2023, GBD Spinal Cord Injuries Collaborators, (Cited by 20)^ DOI: https://doi.org/10.1016/S2665-9913(23)00232-1, Volume: 11, Issue: 5, Pages: e670-e682.
- *Global, regional, and national burden of other musculoskeletal disorders, 1990–2020, and projections to 2050: a systematic analysis of the Global Burden of Disease Study 2021, Publication: The Lancet Rheumatology, Publication date: October 25, 2023, GBD 2021 Other Musculoskeletal Disorders Collaborators, (Cited by 23)^ DOI: https://doi.org/10.1016/j.jacc.2023.11.007, Volume: 25, Issue: 82, Pages: 2350–2473.
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*Global Burden of Cardiovascular Diseases and Risks, 1990-2022, Publication: Journal of the American College of Cardiology, Publication date: December 12, 2023, Global Burden of Cardiovascular Diseases and Risks Collaborators, (Cited by 93)^ DOI: https://doi.org/10.1016/j.jacc.2023.11.007, Volume: 25, Issue: 82, Pages: 2350–2473.
2022:
- *Adolescent transport and unintentional injuries: a systematic analysis using the Global Burden of Disease Study 2019, Publication: The Lancet Public Health, Publication date: June 29, 2022, GBD 2019 Adolescent Transport and Unintentional Injuries Collaborators, (Cited by 36)^ DOI: https://doi.org/10.1016/S2468-2667(22)00134-7, Volume: 8, Issue: 7, Pages: e657-e669.
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Probiotics: insights and new opportunities for Clostridioides difficile intervention, Publication: Critical Reviews in Microbiology, Publication date: May 15, 2022, IF=7.2, collaboration with Dr. George. Tegos, Tower Heath, Pennsylvania, USA. Rusha Pal, Ahmad I. M. Athamneh, Riddhi Deshpande, Jose A. R. Ramirez, Kayode T. Adu, Pushpanathan Muthuirulan, Shrikant Pawar, Manuele Biazzo, Yiorgos Apidianakis, Ulrik Kraemer Sundekilde, Cesar de la Puente-Nunez, Mark G. Martens, Dr. George Tegos & Mohamed N. Seleem, (Cited by 10)^^ DOI: https://doi.org/10.1080/1040841X.2022.2072705, Volume: 3, Issue: 49, Pages: 414-434.†††††
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Evaluating Performance of Regression and Classification Models Using Known Lung Carcinomas Prognostic Markers, Publication: Springer Lecture Notes in Computer Science, Publication date: June 18, 2022, Git
collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia^^ [**2022:1], 1,2,3,4,5. DOI: https://doi.org/10.1007/978-3-031-07802-6_35, Volume, Issue, Pages: 13347.†
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**Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: results from the IMPACC study, Publication: The Lancet Discovery Science, Publication date: July 1, 2022 , IF=8.1, collaboration with Dr. Steven. Kleinstein, Yale University, New Haven, Connecticut, USA. Dr. Leying, Yale University, New Haven, Connecticut, USA Dr. Arce, Dr. Kho, Harvard University, Cambridge, USA. Al Ozonoff, Florian Krammer, Ruth R. Montgomery, Ofer Levy, Bjoern Peters, Patrice M. Beckerr, Nadine Rouphael, et. al. (Cited by 35)^ DOI: https://doi.org/10.1016/j.ebiom.2022.104208, Volume: 83, Issue, Pages: 104208.
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*Age–sex differences in the global burden of lower respiratory infections and risk factors, 1990–2019: results from the Global Burden of Disease Study 2019, Publication: The Lancet Infectious Diseases, Publication date: August 12, 2022, GBD 2019 LRI Collaborators, (Cited by 110)^ DOI: https://doi.org/10.1016/S1473-3099(22)00510-2, Volume: 11, Issue: 22, Pages: p1626-1647.
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*Population-level risks of alcohol consumption by amount, geography, age, sex, and year: a systematic analysis for the Global Burden of Disease Study 2020, Publication: The Lancet, Publication date: July 20, 2022, GBD 2020 Alcohol Collaborators, (Cited by 255)^ DOI: https://doi.org/10.1016/S0140-6736(22)00847-9, Volume: 10347, Issue: 400, Pages: p185-235.
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*Assessing performance of the Healthcare Access and Quality Index, overall and by select age groups, for 204 countries and territories, 1990–2019: a systematic analysis from the Global Burden of Disease Study 2019, Publication: The Lancet Global Health, Publication date: October 8, 2022, GBD 2019 Healthcare Access and Quality Collaborators, (Cited by 59)^ DOI: https://doi.org/10.1016/S2214-109X(22)00429-6, Volume: 12, Issue: 10, Pages: e1715-e1743.
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*The global, regional, and national burden of benign prostatic hyperplasia in 204 countries and territories from 2000 to 2019: a systematic analysis for the Global Burden of Disease Study 2019, Publication: The Lancet Health Longevity, Publication date: October 22, 2022, GBD 2019 Benign Prostatic Hyperplasia Collaborators, (Cited by 73)^ DOI: https://doi.org/10.1016/S2666-7568(22)00213-6, Volume: 11, Issue: 3, Pages: e754-e776.
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*Global mortality associated with 33 bacterial pathogens in 2019: a systematic analysis for the Global Burden of Disease Study 2019, Publication: The Lancet, Publication date: November 22, 2022, GBD 2019 Antimicrobial Resistance Collaborators, (Cited by 638)^ DOI: https://doi.org/10.1016/S2666-7568(22)00213-6, Volume: 11, Issue: 3, Pagese754-e776.
2021:
- *Mapping subnational HIV mortality in six Latin American countries with incomplete vital registration systems, Publication: BioMed Central BMC Medicine, Publication date: January 8, 2021, Local Burden of Disease Study, (Cited by 91)^ DOI: 10.1186/s12916-020-01876-4, Volume: 1, Issue: 9, Pages: 4.
- Hemoglobin induces early and robust biofilm development in Streptococcus pneumoniae by a pathway that involves comC but not the cognate comDE two-component system, Publication: ASM Infection and Immunity, Publication date: January 1, 2021, Github, IF=3.6, Fahmina Akhter, Edroyal Womack, Jorge E. Vidal, Yoann Le Breton, Kevin S. McIver, Shrikant Pawar, Eichenbaum Zehava, collaboration with Dr. Zehava. Eichenbaum, Georgia State University, Atlanta, USA. (Cited by 10)^^^ DOI: 10.1128/IAI.00779-20, Volume: 4, Issue: 89,Pages: e00779-20.†††††
- Current clinical trials and patent update on lung cancer: a retrospective review, Publication: Future Science Lung Cancer Management, Publication date: 15 February, 2021, collaboration with Dr. Harshul. Batra, Georgia State University, Atlanta, USA. (Cited by 10)^^^ DOI: https://doi.org/10.2217/lmt-2020-0029, Volume: 10, Issue: 2, Pages.†
- Sustainable Solutions for Overcoming Transportation and Pollution Problems in Smart Cities Springer, Publication: Advances in Sustainability Science and Technology, Publication date: 15 March, 2021^^^ DOI: https://doi.org/10.1007/978-981-33-4901-8, Volume, Issue, Pages: 65-73.†
- *Hearing loss prevalence and years lived with disability, 1990–2019: findings from the Global Burden of Disease Study 2019, Publication: The Lancet, Publication date: March 13, 2021 (Cited by 589)^ DOI: https://doi.org/10.1016/S0140-6736(21)00516-X, Volume: 10278, Issue: 397, Pages: p996-1009.
- RNA-seq and miRNA-seq data from pharmacological inhibition of the G9a/GLP histone methyltransferase complex with UNC0642 in SAMP8 mice, Publication: Elsevier Data in Brief, Publication date: May 03, 2021, Shrikant Pawar, AinaBellver-Sanchis, ChristianGriñán-Ferré, Github, IF=1.38,
Dr. ChristianGriñán-Ferré, University of Barcelona, Spain^^^ DOI: https://doi.org/10.1016/j.dib.2021.107114, Volume: 36, Issue, Pages: 107114.††
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*Spatial, temporal, and demographic patterns in prevalence of smoking tobacco use and attributable disease burden in 204 countries and territories, 1990–2019: a systematic analysis from the Global Burden of Disease Study 2019, Publication: The Lancet, Publication date: May 27, 2021, GBD 2019 Tobacco Collaborators, (Cited by 488)^ DOI: https://doi.org/10.1016/S0140-6736(21)01169-7, Volume: 10292, Issue: 397, Pages: p2337-2360.
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*Spatial, temporal, and demographic patterns in prevalence of chewing tobacco use in 204 countries and territories, 1990–2019: a systematic analysis from the Global Burden of Disease Study 2019, Publication: The Lancet Public Health, Publication date: May 27, 2021, GBD 2019 Chewing Tobacco Collaborators, (Cited by 63)^ DOI: https://doi.org/10.1016/S2468-2667(21)00065-7, Volume: 7, Issue: 6, Pages: e482-e499.
- *Subnational mapping of HIV incidence and mortality among individuals aged 15–49 years in sub-Saharan Africa, 2000–18: a modelling study, Publication: The Lancet HIV, Publication date: June 01, 2021 (Cited by 35)^ DOI: https://doi.org/10.1016/S2352-3018(21)00051-5, Volume: 6, Issue: 8, Pages: e363-e375.
- G protein-coupled receptors as candidates for modulation and activation of the chemical senses in decapod crustaceans, Publication: Public Library of Science
Plos One, Publication date: June 04, 2021, Github, IF=3.8, collaboration Durby Charles Dr. Yang, Georgia State University, Atlanta, USA. Local Burden of Disease HIV Collaborators
, (Cited by 11)^^^ DOI: https://doi.org/10.1371/journal.pone.0252066, Volume: 6, Issue: 16, Pages: e0252066.†††† - *Measuring routine childhood vaccination coverage in 204 countries and territories, 1980–2019: a systematic analysis for the Global Burden of Disease Study 2020, Release 1, Publication: The Lancet, Publication date: July 14, 2021, GBD 2020 Vaccine Coverage Collaborators, (Cited by 119)^ DOI: https://doi.org/10.1016/S0140-6736(21)00984-3, Volume: 10299, Issue: 398, Pages: p503-521.
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*Global, regional, and national progress towards Sustainable Development Goal 3.2 for neonatal and child health: all-cause and cause-specific mortality findings from the Global Burden of Disease Study 2019, Publication: The Lancet, Publication date: August 17, 2021, GBD 2019 Under-5 Mortality Collaborators, (Cited by 322)^ DOI: https://doi.org/10.1016/S0140-6736(21)01207-1, Volume: 398, Issue: 10303, Pages: p870-905.
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Machine learning for identification and characterization of molecular gene signatures in progression of benign tumors, Publication: ACM Proceedings, Publication date: August 23, 2021, Github Git collaboration with, Chopade, presently with ChestAi, https://www.ch estai.org/,Dr. Stanam, University of Iowa, Iowa City, USA Indian Institute of Technology, Kharagpur^^1, 2, 3. DOI: https://doi.org/10.1145/3469213.3469214, Volume, Issue, Pages: 1-3.†
- LinkedImm: a linked data graph database for integrating immunological data. Publication: BioMed Central BMC Bioinformatics, Publication date: August 26, 2021, Github, IF=3.3,
collaboration with Dr. Steven. Kleinstein, Yale University, Bukhari S, New Haven, Connecticut, USA Dr. Kei, Yale University, New Haven, Connecticut, USA. (Cited by 10)^ DOI: https://doi.org/10.1186/s12859-021-04031-9, Volume: 9, Issue: 22, Pages: 105.†††
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*Tracking development assistance for health and for COVID-19: a review of development assistance, government, out-of-pocket, and other private spending on health for 204 countries and territories, 1990–2050, Publication: The Lancet, Publication date: September 23, 2021, Global Burden of Disease 2020 Health Financing Collaborator Network, (Cited by 94)^ DOI: https://doi.org/10.1007/978-981-16-2377-6_1, Volume: 235, Issue, Pages.
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Techniques of Time Series Modeling in Complex Systems, Publication: Springer Lecture Notes in Networks and Systems, Publication date: September 24, 2021,Github
collaboration with Dr. Aditya. Stanam, University of Iowa, Iowa City, USA^^^ [**2021:27], 1, 2, 3. DOI: https://doi.org/10.1016/S2665-9913(23)00098-X, Volume: 6, Issue: 5, Pages: e316-e329.†
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Single shot detector application for image disease localization, Publication: bioRxiv, Publication date: September 24, 2021,
Github Git Video App Product collaboration with, Chopade, presently with ChestAi, https://www.chestai.org/, Dr. Stanam, University of Iowa, Iowa City, USA, Indian Institute of Technology, Kharagpur^^
DOI: https://doi.org/10.1101/2021.09.21.461307, Volume, Issue, Pages.†
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*Global, regional, and national sex differences in the global burden of tuberculosis by HIV status, 1990–2019: results from the Global Burden of Disease Study 2019, Publication: The Lancet Infectious Diseases, Publication date: September 25, 2021, GBD 2019 Tuberculosis Collaborators, (Cited by 93)^ DOI: https://doi.org/10.1016/S1473-3099(21)00449-7, Volume: 22, Issue: 2, Pages: p222-241.
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*Global, regional, and national sex-specific burden and control of the HIV epidemic, 1990–2019, for 204 countries and territories: the Global Burden of Diseases Study 2019, Publication: The Lancet HIV, Publication date: September 27, 2021, GBD 2019 HIV Collaborators, (Cited by 82)^ DOI: https://doi.org/10.1016/S2352-3018(21)00152-1, Volume: 8, Issue: 10, Pages: e633-e651.
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*Fatal police violence by race and state in the USA, 1980–2019: a network meta-regression, Publication: The Lancet, Publication date: October 1, 2021, GBD 2019 Police Violence US Subnational Collaborators, (Cited by 124)^ DOI: https://doi.org/10.1016/S0140-6736(21)01609-3, Volume: 398, Issue: 10307, Pages: p1239-1255.
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Extracellular calcium alters calcium-sensing receptor network integrating intracellular calcium-signaling and related key pathway, Publication: Nature Publishing Group NPG Scientific Reports, Publication date: October 19, 2021,Github, IF=4.9, Gorkhali R, Tian L, Dong B, Shrikant Pawar, Jenny Yang, collaboration with Dr. Jenny. Yang, Georgia State University, Dr. Rakshya, Georgia State University, Atlanta, USA. (Cited by 16)^^^ DOI: https://doi.org/10.1038/s41598-021-00067-2, Volume, Issue: 11, Pages: 20576.†††††
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Bioinformatics Algorithms and Software for Predicting Microbiomes, Publication: Springer Microbiome in Human Health and Disease, Publication date: October 21, 2021, Shrikant Pawar, Tan YC, Dr. Lahiri, collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia^^^ DOI: https://doi.org/10.1007/978-981-16-3156-6_14, Volume, Issue, Pages: pp 275–296.
††
- Cyclical Learning Rates (CLR’s) for Improving Training Accuracies and Lowering Computational Cost, Publication: Research Square, Publication data: December 21, 2021, Github, Video, App, Product
Chopade, R. presently with ChestAi, Stanam, A., Anand, N., Shrikant Pawar. Collaboration with, Chopade Git, presently with ChestAi, https://www.chestai.org/, Dr. Narayanan, Johnson & Johnson, Pennsylvania, USA, Indian Institute of Technology, Kharagpur^^ DOI: https://doi.org/10.21203/rs.3.rs-1129014/v1, Volume, Issue, Pages.
- Hypoxia drives centrosome amplification in cancer cells via HIF-1α-dependent induction of polo-like kinase 4, Publication: AACR Mol Cancer Res, Publication date: December 22, 2021, Github, IF=6.3, Mittal., Kaur, J., Sharma, S., Sharma, N., Wei, G., Choudhary, I., Imhansi-Jacob, P., Maganti, N., Pawar, Shrikant., Rida, P., Toss, M. S., Aleskandarany, M., Janssen, E. A., Soiland, H., Gupta, M. V., Reid, M. D., Rakha, E. A., & Dr. Aneja, collaboration with Dr. Ritu. Aneja, Georgia State University, Atlanta, USA. (Cited by 12)^^^ DOI: 10.1158/1541-7786.MCR-20-0798, Volume: 20, Issue: 1, Pages: 596-606.†††††
2020:
- Comparison of transcriptomes from two chemosensory organs in four decapod crustaceans reveals hundreds of candidate chemoreceptor proteins, Publication: Public Library of Science Plos One, Publication date: March 12, 2020, Mihika T Kozma, Hanh Ngo-Vu, Yuen Yan Wong, Neal S Shukla, Shrikant D Pawar, Adriano Senatore, Manfred Schmidt, Charles Derby, Github, IF=3.7. collaboration with Dr. Mihika. Kozma, Georgia State University, Atlanta, USA. (Cited by 43)^^^ DOI: 10.1371/journal.pone.0230266, Volume: 15, Issue: 3, Pages: e0230266.†††††
- *Causes of blindness and vision impairment in 2020 and trends over 30 years, and prevalence of avoidable blindness in relation to VISION 2020: the Right to Sight: an analysis for the Global Burden of Disease Study, Publication: The Lancet Global Health, Publication date: May 2, 2020, ISSN 2214-109X, https://doi.org/10.1016/S2214-109X(20)30489-7, Global Burden of Disease Study, (Cited by 1345)^ DOI: https://doi.org/10.1016/S2214-109X(20)30489-7, Volume: 9, Issue: 2, Pages: e144-e160.
- Effects of temperature on COVID-19 transmission, Publication: medRxiv, Publication date: March 29, 2020, Github. Shrikant Pawar, Stanam, A., Mamata Chaudhari, Durga Rayudu, (Cited by 43)^ DOI: https://doi.org/10.1016/S2214-109X(20)30489-7, Volume: 9, Issue: 2, Pages: e144-e160.†
- DNA Encoded Glycan Libraries as a next-generation tool for the study of glycan-protein interactions, Publication: bioRxiv, Publication date: March 31, 2020, Github Github
Shukkoor M. Kondengaden, Jiabin Zhang, Huajie Zhang, Aishwarya Parameswaran, Shameer M. Kondengadan, Shrikant Pawar, Akhila Puthengot, Rajshekhar Sunderraman, collaboration with Dr. Shukkor, Georgia State University, Atlanta, USA. (Cited by 10)^^^ DOI: https://doi.org/10.1101/2020.03.30.017012, Volume, Issue, Pages.
- Clustering Reveals Common Check-Point and Growth Factor Receptor Genes Expressed in Six Different Cancer Types, Publication: Springer: Lecture Notes in Computer Science, Publication date: April 30, 2020, Github
collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia. (Cited by 10)^^^ [**2020:6], 1,2,3,4. DOI: https://doi.org/10.1016/S2665-9913(23)00098-X, Volume: 6, Issue: 5, Pages: e316-e329.
- PLK4 is a HIF-1α target gene: A novel mechanism inducing centrosome amplification in tumor cell, Publication: AACR; Cancer Res 2020;80(16 Suppl), Publication date: August 3, 2020, IF=13.3, Mittal, Jaspreet Kaur, Shaligram Sharma, Ishita Choudhary, Guanhao Wei, Precious Imhansi Jacob, Da Hoon Choi, Nagini Maganti, Shrikant Pawar, Michael, collaboration with Dr. Ritu. Aneja, Georgia State University, Atlanta, USA^^^ DOI: https://doi.org/10.1158/1538-7445.AM2020-3560, Volume: 80, Issue: 16, Pages: 3560.†††††(Abstract).
- Common cancer biomarkers of breast and ovarian types identified through artificial intelligence, Publication: Wileys: Chemical Biology and Drug Design, Publication date: May 15, 2020, IF=2.9, Shrikant Pawar, Tuck Onn Liew, Stanam, A., Dr. Lahiri, collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia .(Cited by 10)^^^ DOI: 10.1111/cbdd.13672, Volume: 96, Issue: 3, Pages: 995-1004.††
- Hemoglobin stimulates vigorous growth of Streptococcus pneumoniae and shapes the pathogen’s global transcriptome, Publication: Nature Publishing Group NPG: Scientific Reports, Publication date: September 15, 2020, IF=4.9, Fahmina Akhter, Edroyal Womack, Jorge E. Vidal, Yoann Le Breton, Kevin S. McIver, Shrikant Pawar & Eichenbaum Zehava, collaboration with Dr. Zehava. Eichenbaum, Georgia State University, Atlanta, USA (Cited by 15)^^^ DOI: 10.1038/s41598-020-71910-1, Volume: 10, Issue: 1, Pages: 15202.†††††
- Scalable, Reliable and Robust Data Mining Infrastructures. Publication: IEEE Fourth World Conference on Smart Trends in Systems, Security and Sustainability, London, Publication date: October 06, 2020^^^ [**2020:7], 1,2,3,4, 5. DOI: 10.1109/WorldS450073.2020.9210388, Volume, Issue, Pages: 123-125.†
2019:
- Delineating the plausible molecular vaccine candidates and drug targets of multidrug resistant Acinetobacter baumannii, Publication :Frontiers in Cellular and Infection Microbiology, Publication date: May 23, 2019, Dr. Lahiri, Shama Mujawar, Shrikant Pawar, Derek Gatherer, Github IF=4.3.
collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia. (Cited by 22)^^^ DOI: 10.3389/fcimb.2019.00203, Volume: 9, Issue: 20, Pages: 203.††††
- Developing a DEVS-JAVA Model to Simulate and Pre-test Changes to Emergency Care Delivery in a Safe and Efficient Manner, Publication: Springer: Lecture Notes in Computer Science, Publication date: April 30, 2019, Github
collaboration with Dr. Aditya. Stanam, University of Iowa, Iowa City, USA. (Cited by 10)^^^ DOI: https://doi.org/10.1007/978-3-030-17935-9_1, Volume, Issue, Pages: pp 3–14.†
- Structural studies of antiviral inhibitor with HIV-1 protease bearing drug resistant substitutions of V32I, I47V and V82I, Publication date: May 12, 2019, Publication Elsevier: Biochemical and Biophysical Research Communications, Shrikant Pawar, Yuan-FangWang, Andres Wong-Sam, Johnson Agniswamy, Arun K. Ghosh, Robert W. Harrison, and Irene T. Weber, IF=3.1.Dissertation collaboration with Dr. Robert. Harrison and Dr. Irene. Weber, Georgia State University, Atlanta, USA. (Cited by 17), (The research was supported in part by the National Institutes of Health (NIH) grant GM062920 (ITW & RWH)).^^^1,2,3,4,5. DOI: 10.1016/j.bbrc.2019.05.064, Volume: 3, Issue: 514, Pages: 974-978.††
- RodentSQL https://www.biomedicine.video/methods-technologies/rodentsql-software-suite-animal-protocols, Publication date: October 1, 2019, Video Journal of Biomedicine: DOI 10.2217/vjbm-2019-0002, collaboration with Dr. Harshul. Batra, Georgia State University, Atlanta, USA^^^ DOI: 10.4155/fsoa-2018-0054, Volume: 9, Issue: 4, Pages: FSO330.††
- HIV-1 protease triple mutants V32I, I47V, V82I with GRL-011-11A (a methylamine bis-Tetrahydrofuran P2-Ligand, sulfonamide isostere derivate), Publication date: May 29, 2019, Publication: RCSB PDB DOI: 10.2210/pdb6OTG/pdb, Yuan-Fang Wang, Shrikant Pawar and Irene T. Weber, .Dissertation collaboration with Dr. Robert. Harrison and Dr. Irene. Weber, Georgia State University, Atlanta, USA^^^ DOI: https://doi.org/10.2210/pdb6OTG/pdb, Volume, Issue, Pages.††
- Web-Based Application for Accurately Classifying Cancer Type from Microarray Gene Expression Data Using a Support Vector Machine (SVM) Learning Algorithm, Publication: Springer: Lecture Notes in Computer Science, Publication date: April 15, 2019, Github. (Cited by 10)^^^ DOI: https://doi.org/10.1007/978-3-030-17935-9_14, Volume: 11466, Issue, Pages: 149-154.†
- A Six-Gene-Based Prognostic Model Predicts Survival in Head and Neck Squamous Cell Carcinoma Patients, Publication date: January 1, 2019, Publication: Springer: Journal of Maxillofacial and Oral Surgery, Github, IF=1.0,
collaboration with Dr. Aditya. Stanam, University of Iowa, Iowa City, USA. (Cited by 10)^^^ DOI: 10.1007/s12663-019-01187-z, Volume: 18, Issue: 2, Pages: 320-327.†
- Curcumin in combination with anti-cancer drugs: A nanomedicine review, Publication date: January 1, 2019, Publication: Elsevier: Pharmacological Research, IF=10.3, collaboration with Dr. Harshul. Batra, Georgia State University, Atlanta, USA collaboration with Dr. Batra, Georgia State University, Atlanta, USA. Harshul Batra, Shrikant Pawar and Bahl D, (Cited by 146)^^^ DOI: 10.1016/j.phrs.2018.11.005, Volume: 139, Issue, Pages: 91-105.††
- Current clinical trials update on HIV/AIDS: a systematic review. Publication date: February 1, 2019, Publication: International Journal of HIV-Related Problems: HIV & AIDS Review, collaboration with Dr. Harshul. Batra, Georgia State University, Atlanta, USA .(Cited by 10)^^^ DOI: https://doi.org/10.5114/hivar.2019.86371, Volume: 2, Issue: 18, Pages: 79-84.
- Predicting the prognosis for cancer patients with interleukins gene expression level, Publication date: April 4, 2019, Publication: AACR; Cancer Res 2019;79(13 Suppl), Github, IF=13.3, collaboration with Dr. Aditya. Stanam, University of Iowa, Iowa City, USA^^^ [**2019:8], DOI: https://doi.org/10.1016/S2665-9913(23)00098-X,Volume: 6, Issue: 5, Pages: e316-e329.††
- Precision medicine and future of cancer treatment, Publication date: January 1, 2019, Publication: Precision Cancer Medicine, Rohit C, Shrikant Pawar, Dr. Chandrajit. Lahiri, collaboration with Dr. Lahiri, Sunway University, Malaysia (Cited by 11)^^^ DOI: 10.21037/pcm.2019.09.01, Volume: 2, Issue, Pages.
- Spermine and oxacillin stress response on the cell wall synthesis and the global gene expression analysis in Methicillin-resistance Staphylococcus aureus, Publication date: January 6, 2019, Publication: Springer: Genes and Genomics, Shrikant Pawar, Xiangyu Yu and Dr. Chung-Dar Lu, Github IF=2.0..Dissertation
collaboration with Dr. Chung-dar Lu, Georgia State University, Atlanta, USA (Cited by 10)^^^ DOI: 10.1007/s13258-018-0735-8, Volume: 41, Issue: 1, Pages: 43-59.††
- In Silico Approaches for Unearthing Bacterial Quorum-Sensing Inhibitors Against Pathogenic Bacteria, Publication date: November 12, 2019, Publication: Springer: Implication of Quorum Sensing and Biofilm Formation in Medicine, Agriculture and Food Industry, Shrikant Pawar, P Brahma, Dr. Lahiri, collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia. (Cited by 10)^^^ DOI: 10.3389/fcimb.2018.00269, Volume: 8, Issue: 7, Pages: 269.
2018:
- Analysis of drug resistance in HIV protease, publication date October 4, 2018, Publication: BioMed Central, BMC: Bioinformatics, Github, IF=3.3..Dissertation, Shrikant Pawar, Chris Freas, Robert W. Harrison, and Irene T. Weber, collaboration with Dr. Robert. Harrison and Dr. Irene. Weber, Georgia State University, Atlanta, USA (Cited by 26),(The research was supported in part by the National Institutes of Health (NIH) grant GM062920 (ITW & RWH)).^^^ DOI: 10.1186/s12859-018-2331-y, Volume: 19, Issue: 11, Pages: 262.††.
- RodentSQL: a software suite for colony management of animal protocols, Publication date: September 2, 2018, Publication Future Science OA, Github, IF=5.0, collaboration with Dr. Harshul. Batra, Georgia State University, Atlanta, USA. (Cited by 10) App^^^ DOI: 10.4155/fsoa-2018-0054, Volume: 9, Issue: 4, Pages: FSO330.
- Software effort prediction with algorithm based frameworks, Publication date: September 5, 2018, Publication: International Journal of Engineering and Computer Science, collaboration with Dr. Aditya. Stanam, University of Iowa, Iowa City, USA. (Cited by 10)^^^ DOI, Volume: 9, Issue: 7, Pages: 24206-24213.††
- In silico Identification of the Indispensable Quorum Sensing Proteins of Multidrug Resistant Proteus mirabilis, Publication date: August 4, 2018, Publication: Frontiers and Cellular and Infection Microbiology, Shrikant Pawar, MD Ashraf, Shama Mujawar, Rohit Mishra, and Dr. Lahiri, IF=4.3,
collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia. (Cited by 25)^^^ DOI: 10.3389/fcimb.2018.00269, Volume: 8, Issue: 7, Pages: 269.††
- A side-effect free method for identifying cancer drug targets, Publication date: April 5, 2018, Publication: Nature Publishing Group, MD Ashraf, Shama Mujawar, Shrikant Pawar, and Dr. Lahiri: Scientific Reports, Github, IF=4.9,
collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia. (Cited by 20)^^^ DOI: 10.1038/s41598-018-25042-2, Volume: 1, Issue: 8, Pages: 6669.†††††
- Evaluating the computing efficiencies (specificity and sensitivity) of graphics processing unit (GPU)-accelerated DNA sequence alignment tools against central processing unit (CPU) alignment tool, Publication date: March 31, 2018, Publication: Journal of Bioinformatics and Sequence Analysis Shrikant Pawar, Stanam, A. and Ying Zhu, (Cited by 10)^^^ DOI: https://doi.org/10.5897/JBSA2018.0109, Volume: 2, Issue: 9, Pages: 10-14.††
- Online electronic laboratory notebook: A secured cloud storage system scripted in Hypertext Pre-processor (PHP) programming language, Publication date: February 1, 2018, Publication: Journal of Engineering and Technology Research, Github,
collaboration with Dr. Harshul. Batra, Georgia State University, Atlanta, USA.(Cited by 10)^^^ DOI: https://doi.org/10.5897/JETR2018.0638, Volume: 1, Issue: 10, Pages: 1-6.††
- Quorum sensing: An imperative longevity weapon in bacteria, Publication date: January 1, 2018, Publication: African Journal of Microbiology Research, collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia. (Cited by 16)^^^ DOI: https://doi.org/10.5897/AJMR2017.8751, Volume: 4, Issue: 12, Pages: 96-104.††
- Transcriptomic data for analyzing global gene expression patterns in Methicillin-resistance Staphylococcus aureus in response to spermine and oxacillin stress, Publication date: December 1, 2018, Publication: Elsevier: Data in Brief, IF=1.3, Dissertation, Shrikant Pawar, Xiangyu Yu and Dr. Chung-Dar Lu., collaboration with Dr. Chung-dar Lu, Georgia State University, Atlanta, USA. (Cited by 10)^^^ DOI: 10.1016/j.dib.2018.11.090, Volume, Issue: 21, Pages: 2230-2236.††
2017:
- Evaluation of centrosome clustering protein KIFC1 as a potential prognostic biomarker in serous ovarian adenocarcinomas, Mittal, Da Hoon Choi, Sergey Klimov, Shrikant Pawar, Ramneet Kaur, Anirban Mitra, Meenakshi Vij Gupta, Ralph Sams, Guilherme C, Publication date: May 2, 2017, Publication: ACS: Journal of Clinical Oncology, IF=2.3. collaboration with Dr. Ritu. Aneja, Georgia State University, Atlanta, USA. (Cited by 10)^^^ DOI: https://doi.org/10.1200/JCO.2016.34.15_suppl.e17083,Volume: 15, Issue: 34, Pages: e17083.†††††(Abstract).
- Computational Identification of Indispensable Virulence Proteins of Salmonella Typhi CT18, Publication date: April 3, 2017, Publication: Current Topics in Salmonella and Salmonellosis, collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia. Shrikant Pawar, MD Ashraf, and Dr. Lahiri, (Cited by 14)^^^ DOI: 10.5772/66489,Volume, Issue, Pages.††
2016:
- A centrosome clustering protein, KIFC1, predicts aggressive disease course in serous ovarian adenocarcinomas, Publication date: January 1, 2016, Publication: BioMed Central BMC: Journal of Ovarian Research, IF=5.4, collaboration with Dr. Ritu. Aneja, Georgia State University, Atlanta, USA. (Cited by 60)^^^ DOI: 10.1186/s13048-016-0224-0, Volume: 17, Issue: 9, Pages.†††††
2014:
- Interactome analyses of Salmonella pathogenicity islands reveal SicA indispensable for virulence, Publication date: July 21, 2014, Publication: Elsevier: Journal of Theoretical Biology, IF=2.6, collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia. , Dr. Lahiri, Shrikant Pawar, Radhakrishnan Sabarinathan, Md. Izhar Ashraf, Yamini Chand, Dipshikha Chakravortty, (Cited by 34)^^^ DOI: 10.1016/j.jtbi.2014.08.013, Volume: 363, Issue: 21, Pages: 88-97.†††
- A centrosome clustering suspect, HSET, is a potential biomarker for breast cancer aggressiveness in triple-negative breast cancer (TNBC) patients, Publication: Elsevier: Gynecologic Oncology, Mittal, Da Hoon Choi, Sergey Klimov, Shrikant Pawar, Ramneet Kaur, Anirban K. Mitra, Meenakshi V. Gupta, Ralph Sams, Guilherme Cantuaria, Publication date: October 2, 2024, collaboration with Dr. Ritu. Aneja, Georgia State University, Atlanta, USA^^^1, 2, 3. DOI: 10.1186/s13048-016-0224-0, Volume: 17, Issue: 9, Pages.††††
- KIFCI, a novel putative prognostic biomarker for ovarian adenocarcinomas: delineating protein interaction networks and signaling circuitries, Publication date :July 1, 2014, Publication: BioMed Central, Shrikant Pawar, Shashikiran Donthamsetty, Vaishali Pannu, Padmashree Rida, Angela Ogden, Nathan Bowen, Remus Osan, BMC: Journal of Ovarian Research, Github, IF=5.5.
collaboration with Dr. Ritu. Aneja, Georgia State University, Atlanta, USA. Dr. Nathan J. Bowen, The Center for Cancer Research and Therapeutic Development (CCRTD) at Clark Atlanta University, Georgia, USA. (Cited by 103)^^^ DOI: 10.1186/1757-2215-7-53, Volume: 7, Issue: 12, Pages: 53.††
2013-2011
- Determining the impact of Vitamin E & Selenium supplementation on gene expression in the brains of mice infected with T. gondii, Shrikant Pawar, Dr. Claire Rinehart & Dr. Cheryl Davis, Publication date: March 31, 2013, Publication: Proceedings of International Work-Conference on Bioinformatics and Biomedical Engineering, collaboration with Dr. Claire. Rinehart, Western Kentucky University, Bowling Green, USA^^^^††
- Investigating Emerging Trends of Intraocular Lens (IOL’s) Implantation in Rural India for Cataract, Publication date: 2013, Publication: Opthalmology.††
- Identifying indispensable proteins of the type III secretion systems of Salmonella enterica serovar Typhimurium strain LT2, Publication date: July 1, 2012, Publication: BioMed Central BMC: Bioinformatics, IF=3.1, collaboration with Dr. Chandrajit. Lahiri, Sunway University, Malaysia (Cited by 10)^^^^ DOI: https://doi.org/10.1186/1471-2105-13-S12-A10, Volume: 12, Issue: 13, Pages: A10.††(Abstract).
- Statistical analysis of microarray gene expression data from a mouse model of toxoplasmosis, Publication date: August 1, 2011, Publication: BioMed Central BMC: Bioinformatics, Github, IF=3.1, Shrikant Pawar, Dr. Claire Rinehart & Dr. Cheryl Davis, collaboration with Dr. Claire. Rinehart, Western Kentucky University, Bowling Green, USA. (Cited by 10)^^^^ 1, 2, 3, 4, 5. [**2012:13, 16, 17, 18, 20, 21, 22]. DOI: https://doi.org/10.1186/1471-2105-12-S7-A19, Volume: 12, Issue: 7, Pages: A19.††(Abstract).
- Determining impact of antioxidant supplementation on gene expression in the brains of mice infected with T.gondii, Publication: J. of the Kentucky Academy of Science, 72(2):115-127 (2011). Publication date: June 3, 2011, https://doi.org/10.3101/1098-7096-72.2.115, Shrikant Pawar, Dr. Claire Rinehart & Dr. Cheryl Davis, collaboration with Dr. Claire. Rinehart, Western Kentucky University, Bowling Green, USA^^^^ DOI: https://doi.org/10.3101/1098-7096-72.2.115, Volume: 2, Issue: 72, Pages: 115-127.††(Abstract).
†Corresponding author. ††First author. †††Second author. ††††Third author. †††††author.
Selected conference proceedings:
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International Work-Conference on Bioinformatics and Biomedical Engineering, Granada, Spain, 1 February, 2022. Evaluating Performance of Regression and Classification Models Using Known Lung Carcinomas Prognostic Markers, by Pawar SD, Mittal and Lahiri, Georgia State University, Atlanta, USA and Sunway University, Malaysia. Springer Bioinformatics and Biomedical Engineering, Paper, DOI: https://doi.org/10.1007/978-3-031-07802-6_35, Issue, Volume, Pages: 13347, Presentation, Certificate, Github, Presentation video, PPT^^
- 2nd International Conference on Artificial Intelligence and Information Systems (ICAIIS 3 May, 2021). Artificial intelligence and cancer biomarker discovery, by Shrikant Pawar, Keynote speaker, http://icaiis.org/Keynote-Speekers.html Association of Computing Machinery ACM, Paper, Presentation video, PPT^^
- National Institute of Allergy and Infectious Diseases (NIAID), Human Immunology Project Consortium (HIPC) Single Cell Data Standards Meeting, 3 May, 2021. HIPC standards for submission of single sell transcriptional profiling data, by Kei-Hoi Cheung, Yale University, New Haven, Connecticut, USA Shrikant Pawar, Hailong Meng, Yale University, New Haven, Connecticut, USA, Anthony Melillo, Yale University, New Haven, Connecticut, USA, Jason Greenbaum, Bjoern Peters, and Steven Kleinstein, Yale University, New Haven, Connecticut, USA^
- 4th International Conference on Applied Mathematics and Simulation, 1 September, 2021. Machine learning application in genomics, by Shrikant Pawar, Keynote speaker and general chair, http://www.4th-amms.org/com.html, Github, Presentation video, PPT^
- 4th International Cells in Experimental Life Science Workshop, CELLS, 3 May, 2020. Depositing single cell sequencing data to shared data portals, by Shrikant Pawar, Anthony Melillo, Yale University, New Haven, Connecticut, USA, Hailong Meng, Yale University, New Haven, Connecticut, USA, Darwin D’Souza, Bjoern Peters, Randi Vita, Steven H. Kleinstein, Yale University, New Haven, Connecticut, USA, Kei-Hoi Cheung, Yale University, New Haven, Connecticut, USA.^
- 8th International Work-Conference on Bioinformatics and Biomedical Engineering, Granada, Spain, 1 February, 2020. Clustering reveals common check-point and growth factor receptor genes expressed in six different cancer types, by Pawar SD, Stanam A, University of Iowa, Iowa City, USA and Lahiri C, Sunway University, Malaysia, USA. Springer Bioinformatics and Biomedical Engineering, Paper, DOI: https://doi.org/10.1016/S2665-9913(23)00098-X, Issue: 5, Volume: 6, Pages: e316-e329. Github, Presentation video, PPT^^
- 4th Smart Trends in Systems, Security and Sustainability Conference, London, United Kingdom, 12 March, 2020. Scalable, reliable and robust data mining infrastructures, by Pawar SD, Stanam A, University of Iowa, Iowa City, USA. Poster presentation Link Institute of Electrical and Electronics Engineers IEEE, Paper, DOI: 10.1109/WorldS450073.2020.9210388, Issue, Volume, Pages: 123-125.^^^
- American Association for Cancer Research, Atlanta, GA, 3 March, 2019. Predicting the prognosis for cancer patients with interleukins gene expression level, by Pawar SD, Stanam A, University of Iowa, Iowa City, USA. Abstract, DOI: https://doi.org/10.1016/S2665-9913(23)00098-X, Issue: 5, Volume: 6, Pages: e316-e329. Poster presentation Link, Poster presentation Link, Github^^^
- Scientific Computing Conference, Atlanta, Georgia, USA, 21 October, 2018. Studies of four investigational protease inhibitors with HIV-1 protease bearing drug resistant substitutions of V32I, I47V and V82I, by Pawar SD, Irene Weber, and Robert Harrison, Georgia State University, Atlanta, USA. Poster presentation Link Elsevier Biochemical and Biophysics Research Communication BBRC, Paper, Pic, Github.Dissertation^^^(The research was supported in part by the National Institutes of Health (NIH) grant GM062920 (ITW & RWH)).[**2018:9, 11].
- Scientific Computing Conference, Atlanta, Georgia, USA, 2 October, 2017. Analysis of Drug Resistance in HIV PR, by Pawar SD, Irene Weber, Christopher F, and Robert Harrison, Georgia State University, Atlanta, USA. Poster presentation Link, DOI: 10.1186/s12859-018-2331-y, Issue: 11, Volume: 19, Pages: 262. Poster presentation, Github.Dissertation^^^(The research was supported in part by the National Institutes of Health (NIH) grant GM062920 (ITW & RWH)).[**2017:10].(ITW & RWH))
- Computer Science Poster & Demo Day, Atlanta, Georgia, USA, 21 October, 2018. Studies of four investigational HIV-1 protease inhibitors, by Pawar SD, Irene Weber, and Robert Harrison, Georgia State University, Atlanta, USA. https://grid.cs.gsu.edu/xhu/CSPoster&DemoDay/PastProgram_2018Fall.pdf–Poster, Github.Dissertation (The research was supported in part by the National Institutes of Health (NIH) grant GM062920 (ITW & RWH)).^^^(ITW & RWH))
- 2nd International Conference on Genomics (ICG), Sacremento, California, USA, 1 September, 2013. Topic: ‘Analyzing Expression Pattern’s and Correlation’s for HSET, Survivin & Ki67 genes in ER, PR & HER2 Negative Breast Cancer Patient’s’, by Pawar S.D, Vaishali Phannu, and Ritu Aneja, Georgia State University, Atlanta, USA. Dr. Nathan J. Bowen, The Center for Cancer Research and Therapeutic Development (CCRTD) at Clark Atlanta University, Georgia, USA. (Travel award), Aneja, Poster presentation Link, Github Elsevier Gynecologic Oncology, Paper^^^
- 244th American Chemical Society (ACS) Conference, Sandi ego Convention Center, California, USA, 3 March, 2012. Topic: ‘Statistical Analysis of Microarray Gene Expression Data from a Mouse Model of Toxoplasmosis’, by Pawar S.D, D. Cheryl and R. Claire, Western Kentucky University, Bowling Green, USA. (Travel award), Paper, DOI: https://doi.org/10.1186/1471-2105-12-S7-A19, Issue: 7, Volume: 12, Pages: A19. Github^^^^
- 11th International Conference, Functional Foods and Chronic Inflammation: Science and Practical Application, Sandi ego, California, USA, 30 August, 2012. Topic: ‘Determining the impact of vitamin E and selenium supplementation on gene expression in the brains of mice infected with T. gondii’, by Pawar S.D, D. Cheryl and R. Claire, Western Kentucky University, Bowling Green, USA. Github^^^^
- 11th Annual Kentucky Bio Medical Research Infrastructure (KBRIN) Conference, Seelbach Hilton, Kentucky, USA, 3 March, 2012. Topic: ‘Identifying Indispensable Proteins of the Type III Secretion Systems of Salmonella enterica serovar Typhimurium strain LT2’, by Pawar S.D, Luo Q, Sabarinathan R, Ashraf M, and Lahiri C, Sunway University, Malaysia.^^^^ [**2011:15].
- 112th Sigma Xi Annual Meeting & International Research Conference, Raleigh, North Carolina, USA, 21 November, 2011. Topic: ‘Statistical Analysis of Microarray Gene Expression Data from a Mouse Model of Toxoplasmosis’, by Pawar S.D, D. Cheryl and R. Claire, Western Kentucky University, Bowling Green, USA. Github, BioMed Central BMC Bioinformatics, (Travel award), Paper, DOI: https://doi.org/10.1186/1471-2105-12-S7-A19, Issue: 7, Volume: 12, Pages: A19.^^^^
- WKU Bio informatics and Information Science Center (WKU-BISC) Research Symposium, Western Kentucky University, Bowling Green, Kentucky, USA, 3 November, 2011. Topic: ‘Statistical Analysis of Microarray Gene Expression Data from a Mouse Model of Toxoplasmosis’, by Pawar S.D, D. Cheryl and R. Claire, Western Kentucky University, Bowling Green, USA. Poster presentation, DOI: https://doi.org/10.1186/1471-2105-12-S7-A19, Issue: 7, Volume: 12, Pages: A19. Github^^^^
- 97th Annual Kentucky Academy of Science (KAS) Conference, Murray State University, Murray, Kentucky, USA, 30 November, 2011. Topic: ‘Statistical Analysis of Microarray Gene Expression Data from a Mouse Model of Toxoplasmosis’, by Pawar S.D, D. Cheryl and R. Claire, Western Kentucky University, Bowling Green, USA. Fall 2011 KAS Publication, DOI: https://doi.org/10.1186/1471-2105-12-S7-A19, Issue: 7, Volume: 12, Pages: A19. Github^^^^
- 97th Annual Kentucky Academy of Science (KAS) Conference, Murray State University, Murray, Kentucky, USA, 2 November, 2011. Topic: ‘Elucidation of mechanism of anti H. pylori activity of Hesperidin by determination of modulated expression endogenous biomarkers in laboratory rats’, by Pawar S.D, P. Ghosh, A.D. Kandhare, T.P. Gosavi, and S. L. Bodhankar.^^^^
- 41st Annual Student Research Conference (WKU ASRC), Western Kentucky University, Bowling Green, Kentucky, USA, 2 March, 2011. Topic: ‘Statistical Analysis of Microarray Gene Expression Data from a Mouse Model of Toxoplasmosis’, by Pawar S.D, D. Cheryl and R. Claire, Western Kentucky University, Bowling Green, USA. Poster presentation Link, DOI: https://doi.org/10.1186/1471-2105-12-S7-A19, Issue: 7, Volume: 12, Pages: A19. Github^^^^
- 10th Annual Kentucky Bio Medical Research Infrastructure (KBRIN) Conference, University of Memphis, Tennessee, USA, 4 January, 2011. Topic: ‘Comparing Vitamin E and Selenium diet effects on Brain of a Normal and Toxoplasma infected mice’, by Pawar S.D, D. Cheryl and R. Claire, Western Kentucky University, Bowling Green, USA.^^^^
- 96th Annual Kentucky Academy of Science (KAS) Conference, Western Kentucky University, Bowling Green, Kentucky, USA, 1 November, 2010. Topic: ‘Identification of differentially expressed genes in mice brain with Agilent Microarray amongst normal mice on diet without Vitamin E and Selenium, normal mice on diet with Vitamin E and Selenium, Mice infected with Toxoplasma Gondi but diet without Vitamin E and Selenium and Mice infected with Toxoplasma Gondi and diet containing Vitamin E and Selenium’, by Pawar S.D, D. Cheryl and R. Claire, Western Kentucky University, Bowling Green, USA (Travel award). Github^^^^
- Sustainable Horizons Institute (SHI) and Berkeley Lab Computing Sciences SRP Workshop, Berkeley Lab, California, USA, 21 December, 2021, Application of neural networks for aiding lung diagnosis of lung disorders, by Pawar S.D, R. Chopade Git (Presently with ChestAi, https://www.chestai.org/) and A. Stanam, University of Iowa, Iowa City, USA. https://docs.google.com/presentation/d/1p4RRB2QZLeFBTxjjr_ZpzpGblMuqdyIC/edit#slide=id.p1 Poster presentation Link, Github, Product, App,
^^
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U-RISE Research mentor, 2022: Machine learning techniques for analyzing and interpreting genomics and proteomics data, Pawar S.D^^
- Yale Innovation Summit, New Haven, Connecticut, USA, 1 May, 2022, Eposter: Application of neural networks for aiding lung diagnosis of lung disorders, by Pawar S.D, R. Chopade, Git, (Presently with ChestAi, https://www.chestai.org/) and A. Stanam, University of Iowa, Iowa City, USA https://ventures.yale.edu/yaleinnovationsummit, Product, App^
- 6th World Conference on Smart Trends in Systems, Security, and Sustainability, 21 May, 2022, Neural Networks for predicting severity of ovarian carcinoma by Pawar S.D, R. Chopade (Git Presently with ChestAi, https://www.chestai.org/) and A. Stanam, University of Iowa, Iowa City, USA https://worlds4.co.uk/gallery.html Paper, DOI: http://dx.doi.org/10.1007/978-981-19-7660-5_7, Issue, Volume, Pages. Github, Presentation video, PPT^^
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6th International Congress on Information and Communication Technology, London, United Kingdom, 1 September, 2021. Techniques of time series modeling in complex systems, by Pawar S.D and A. Stanam, University of Iowa, Iowa City, USA. Springer Intelligent Sustainable Systems Paper, DOI: https://doi.org/10.1016/S2665-9913(23)00098-X, Issue: 5, Volume: 6, Pages: e316-e329. Presentation video, PPT^^
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4th National Big Data Health Science Conference, University of South Carolina, Columbia, USA. 2 February, 2023, https://www.sc-bdhs-conference.org/SCICU Undergraduate Student/Faculty Research Symposium, Spartanburg. https://www.scicu.org/events/scicu-undergraduate-student-faculty-research-symposium-3/ Poster presentation Link, Thesis, presentation: https://youtu.be/Jx6Q7TaISIU
(South Carolina Independent Colleges & Universities SCICU award funded project). Role: PI, NSF Identifier: 000879633, (August 1, 2023- August 31, 2027), Award Number: 2242812, Award/Fund Agency Code: 4900, Program Element/Reference Code’s (PEC/Congressional District): 193Y00, 075Z/7715/8037/9150/SMET/03, Assistance Listing Number: 47.083, (Direct costs, Effort=100%)^^
.
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SCICU SC Independent Colleges & Universities Undergraduate Student/Faculty Research Symposium, Spartanburg, South Carolina, USA. 4 February, 2022, https://www.scicu.org/events/scicu-undergraduate-student-faculty-research-symposium-3/ Poster presentation Link
(South Carolina Independent Colleges & Universities SCICU award funded project) Role: PI, (Direct costs, Effort=100%), (February 1, 2022-December 31, 2022), Natural Language Processing in managing and tracking applications, Claflin University, Orangeburg, South Carolina, USA student **Joshua Kiprano+π (Thesis Advisor), Presently software engineer at Atlassian, Pawar Shrikant, https://scicu.org/about-scicu/programs/, https://scicu.org/site/wp-content/uploads/2023/06/SCICU-2022-Annual-Report-final.pdf, Pic, https://campuspress.yale.edu/shrikantpawar/files/2024/02/SCICU-2023-625e275a93f01498-300×200.jpeg GitHub^^
Project: https://www.claflin-computation.com/_files/ugd/81dd80_0fc28fef39d94861ad5b18e83391a167.docx?dn=JoshuaKipronoThesisDraft.docx
PPT: https://www.claflin-computation.com/_files/ugd/81dd80_8bb6fb5a75384bd5888fd7d8f43d51af.pdf
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6th International Conference on Computational Vision and Bio Inspired Computing ICCVBIC 21 May, 2022. Springer Proceedings of Sixth International Congress on Information and Communication Technology Paper, DOI: http://dx.doi.org/10.1007/978-981-19-9819-5_49, Issue, Volume, Pages. K-fold Semi-supervised Self-learning Technique for Image Disease Localization, by Chopade Git, (Presently with ChestAi, https://www.chestai.org/), Stanam, University of Iowa, Iowa City, USA and Pawar. Product,
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10th International Work-Conference on Bioinformatics and Biomedical Engineering, Gran Canaria, Spain, 2 February, 2023. Cyclical Learning Rates (CLR’s) for Improving Training Accuracies and Lowering Computational Cost, by Narayanan, Johnson and Johnson, Chopade Git (Presently with ChestAi, https://www.chestai.org/), Stanam, University of Iowa, Iowa City, USA Pawar. IWBBIO-Pawar-23, Presentation, Certificate, App, Product, Springer Bioinformatics and Biomedical Engineering Paper, (National Science Foundation South Carolina Established Program for Stem Cooperative Research Role: Co-PI, NSF Identifier: 000879633, Award Number: 2242812, Award/Fund Agency Code: 4900, Program Element/Reference Code’s (PEC/Congressional District): 193Y00, 075Z/7715/8037/9150/SMET/03, Assistance Listing Number: 47.083 (August 1, 2023- August 31, 2027) (Direct costs, Effort=100%) (SC EPSCoR, Grant/award/project title: “AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina (ADAPT)”), RII Track-1 award funded project), GitHub, Poster presentation, DOI: https://doi.org/10.1007/978-3-031-34960-7_23, Issue, Volume: 13920, Pages.
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Managing research effectively, 1 May, 2023 online summer school by Narayanan A, Johnson and Johnson, Lahiri C, Sunway University & Pawar S, Center for Research, Innovation & Translation, Department of Biotechnology, Atmiya University, India.
Summer_School_Bioinformatics
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2023 Claflin University, Orangeburg, South Carolina, USA Biomedical/Biomaterials Research Summer Program (BR-SIP), 3 May, 2024, Utilization of Machine Learning Techniques for Aiding Detection of Ischemic Stroke Lesion, Infarct Volumes, and Small-artery Occlusion. Poster presentation, Biomarker Identification for the Diagnosis of Chronic Lymphocytic Leukemia (CLL). Poster presentation, Github, (Claflin University, Orangeburg, South Carolina, USA seed funded project) Role: PI, (Direct costs, Effort=100%)^^Project: https://campuspress.yale.edu/shrikantpawar/files/2024/04/Seed-Report-2023-d26fc72513e269e3.docx Springer
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7th World Conference on Smart Trends in Systems, Security, and Sustainability (WorldS4 3 May, 2023), Stroke risk stratification using neural networks. https://worlds4.co.uk/agenda.html Smart trends in systems Presentation certificate, Github, Springer Intelligent Sustainable Systems Paper, DOI: https://doi.org/10.1007/978-981-99-8031-4_3, Issue, Volume: 812, Pages: pp 21–31. Presentation video, PPT, (Claflin University, Orangeburg, South Carolina, USA seed funded project) Role: PI, (May 1, 2023- August 31, 2023)
(May 1, 2023- August 31, 2023) (Direct costs, Effort=100%)^^
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Congress on Smart Computing Technologies (CSCT 1 February, 2023), SAU Center for Research and Innovative Learning (SCRIL): https://scril.sau.int/csct23/page/programschedule. Evaluating Differences in Small Object Localization using Semantic Segmentation & Single Shot Detector (SSD) Bounding Box Algorithm
Presentation video, PPT^^
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5th National Big Data Health Science Conference (1 February, 2024), University of South Carolina, Columbia, Cyclical Learning Rates (CLR’S) for Improving Training Accuracies and Lowering Computational Cost, Rushikesh Chopade Git (Presently with ChestAi, https://www.chestai.org/), Aditya Stanam, University of Iowa, Iowa City, USA, Anand Narayanan, Johnson and Johnson, Pennsylvania, USA & Shrikant Pawar Product Springer Bioinformatics and Biomedical Engineering Paper, DOI: https://doi.org/10.1007/978-3-031-34960-7_23, Issue, Volume: 13920, Pages. USC-BigData-2024 Poster presentation, GitHub, (National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), Grant/award/project title: “AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina (ADAPT)”, RII Track-1 award funded project) Role: Co-PI, NSF Identifier: 000879633, Award Number: 2242812, Award/Fund Agency Code: 4900, Program Element/Reference Code’s (PEC/Congressional District): 193Y00, 075Z/7715/8037/9150/SMET/03, Assistance Listing Number: 47.083,(August 1, 2023- August 31, 2027) (Direct costs, Effort=100%)^^
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SC Independent Colleges & Universities (SCICU) Undergraduate Student/Faculty Research Symposium, Spartanburg, South Carolina, USA. 2 February, 2024, Poster presentation Poster presentation GitHub (South Carolina Independent Colleges & Universities SCICU award funded project), Claflin University, Orangeburg, South Carolina, USA student **Priscilla E. Fatokun+π, **Owalabi Oluwamayowa+π, Liles Karina, & Pawar, Shrikant, Building a virtual responsive SMARTHOME Role: PI, (Direct costs, Effort=100%) (February 1, 2023-December 31, 2023)^^
Project: https://www.claflin-computation.com/_files/ugd/81dd80_88f5decdd4c44ce497f7f2f71018c63b.docx?dn=Building%20a%20Responsive%20SmartHome.docx Thesis presentation: https://youtu.be/NUPr-kXKCaU
PPT: https://www.claflin-computation.com/_files/ugd/81dd80_65cf61cfe8b8429fae9cfcb31f099f15.pptx?dn=Building%20a%20Responsive%20Smart%20Home.pptx
Project: https://www.claflin-computation.com/_files/ugd/81dd80_5add3a1670ff4c68a3cb307ddbe7e811.docx?dn=Priscilla%20Fatokun%27s%20Thesis.docx
PPT: https://www.claflin-computation.com/_files/ugd/81dd80_9ea49363c6704e198ccbd724c57a3fdc.pptx?dn=Priscilla%20Fatokun%27s%20Presentation.pptx
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9th International Congress on Information and Communication Technology (ICICT-2 May, 2024) London, United Kingdom, Addressing Class Imbalance Problem in Semantic Segmentation using Binary Focal Loss, Rushikesh Chopade Git (Presently with ChestAi, https://www.chestai.org/), Aditya Stanam, University of Iowa, Iowa City, USA & Shrikant Pawar. https://sched.co/1a1eC (National Science Foundation RII Track-1 award funded project) Role: Co-PI, NSF Identifier: 000879633, (August 1, 2023- August 31, 2027), Award Number: 2242812, Award/Fund Agency Code: 4900, Program Element/Reference Code’s (PEC/Congressional District): 193Y00, 075Z/7715/8037/9150/SMET/03, Assistance Listing Number: 47.083, (Direct costs, Effort=100%), Paper, DOI: https://doi.org/10.1007/978-981-97-3559-4_28, Issue, Volume, Pages: p. 351-357. Presentation video, PPT^^
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2024 Southeast Regional Clinical & Translational Science Conference, Atlanta, USA Identifying Diagnostic & Prognostic Biomarker Signatures in Lung Cancer, 1 April, 2024, Yash Singh, Abhay Raheja, Mohit Sai, Karuna Mittal, Georgia State University, Atlanta, USA & Shrikant Pawar. Github, Poster presentation^^
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2024 University of South Carolina 2nd Annual Research Core Fair, Columbia, USA, Research Core Fair, 2 February, 2024- submitted abstracts, Cyclical Learning Rates (CLR’S) for Improving Training Accuracies and Lowering Computational Cost, Rushikesh Chopade, Git (Presently with ChestAi, https://www.chestai.org/), Aditya Stanam, University of Iowa, Iowa City, USA Anand Narayanan, Johnson and Johnson, Pennsylvania, USA & Shrikant Pawar USC Research Core Fair 1 2024 Springer Bioinformatics and Biomedical Engineering Paper, DOI: https://doi.org/10.1007/978-3-031-34960-7_23, Issue, Volume: 13920, Pages. Product, (National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), Grant/award/project title: “AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina (ADAPT)”, RII Track-1 award funded project), Poster presentation, Role: Co-PI, NSF Identifier: 000879633, (August 1, 2023- August 31, 2027), Award Number: 2242812, Award/Fund Agency Code: 4900, Program Element/Reference Code’s (PEC/Congressional District): 193Y00, 075Z/7715/8037/9150/SMET/03, Assistance Listing Number: 47.083, (Direct costs, Effort=100%) GitHub^^
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2024 South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), 4 September, 2024, Annual State Conference, AI-Enabled Construction of Aligned Collagen using Two-Photon Techniques, Dr. Gao Zhi, Poster presentation, (National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), RII Track-1 award funded project), National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), Grant/award/project title: “AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina (ADAPT)”, RII Track-1 Award, GAIN CRP, Role: Co-PI, NSF Identifier: 000879633, (August 1, 2023- August 31, 2027) (Direct costs, Effort=100%), (Grants for Applications in Industry and Networking Collaborative Research Program)^^
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The 4th International Conference on Electrical, Computer and Energy Technologies, 3 May, 2024 (ICECET), Session chair B-IV, Sydney, Australia, ICECET OpenAI’s GPT-3/ChatGPT: Suggests & Corrects, Shrikant Pawar, Pritish Bhave, Rushikesh Chopade Git (Presently with ChestAi, https://www.chestai.org/), Presentation, Certificate, Aditya Stanam, University of Iowa, Iowa City, USA. Github, Overview PPT, IEEE Paper, DOI: https://doi.org/10.1109/ICECET61485.2024.10698683, Issue, Volume, Pages: pp. 1-4. Presentation video^^
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2024 Claflin University, School of Natural Sciences and Mathematics, Undergraduate Research Presentations, Orangeburg, South Carolina, USA, 2 May, 2024, Machine learning applications in computer aided diagnosis (CAD) hemorrhage, brain tumor, stroke, and cervical fractures, Amrinder Singh (Thesis Advisor), Ian Adams, Bimal Itani, Jy-Nese Spivey. Github, Abstract1, Abstract2, Abstract3, Abstract4, PPT1, PPT2, PPT3, PPT4^
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Artificial Intelligence in Genomics, Bridging Molecular Diagnostics from Bench to Computer. 3 April, 2024, National Hands-on Advanced Genomics Workshop, Gujarat State Biotechnology Mission (GSBTM) and Department of Science and Technology, Government of Gujarat, Atmiya University collaboration with Dr. Chadrajit. Lahiri, Sunway University, Malaysia^^ PPT, Github, Presentation video, Certificate.
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2024 South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), AI Research and Education Conference, AI-Enabled Construction of Aligned Collagen using Two-Photon Techniques, 31 October, 2024, Dr. Gao Zhi, Poster presentation (National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), RII Track-1 award funded project) National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), Grant/award/project title: “AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina (ADAPT)”, RII Track-1 Award, Role: Co-PI, NSF Identifier: 000879633, Award Number: 2242812, Award/Fund Agency Code: 4900, Program Element/Reference Code’s (PEC/Congressional District): 193Y00, 075Z/7715/8037/9150/SMET/03, Assistance Listing Number: 47.083 (August 1, 2023- August 31, 2027) (Direct costs, Effort=100%), Machine Learning for Diagnosis of Peripheral Arterial Disease (PAD) from CT Angiography (CTA) Images, **Cailese Beckford+π (Thesis Advisor), **Dinari Sabb+π (Thesis Advisor), Tisdale Verlie, Shrikant Pawar^^GitHub, Poster 1 presentation, Poster 2 presentation.
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US Sciencegateways, SGX3‘s HackHPC, “Adapting High-Performance Computing (HPC) tools in Data Science courses at Claflin University”, October 7-11, 2024, Bozeman, Montana, USA (Travel award).^^ GitHub, Poster presentation
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Genomic Data Science Community Network (GDSCN) symposium, October 16, 2024, University of Puerto Rico, Aguadilla (UPRA), USA with Dr. Chowdhury, Department of Biology, Claflin University, South Carolina, USA (Travel award).
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2025 28th NSF EPSCoR National Conference in Omaha, Nebraska AI-Enabled Construction of Aligned Collagen using Two-Photon Techniques. (National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), Grant/award/project title: “AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina (ADAPT)”, RII Track-1 GAIN CRP (Grants for Applications in Industry and Networking Collaborative Research Program) award funded project Role: Co-PI, NSF Identifier: 000879633, (May 1, 2024- August 31, 2025), (Direct costs, Effort=100%)), 21, October 2024, Subaward, Dr. Gao Zhi, Clemson University, Poster presentation^^
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Developing a Machine-Learning Driven Wearable Vest for Early Diagnosis and Management of Chronic Obstructive Pulmonary Disease through Vitals Analysis, Connecticut Stem Fair, USA, 1 February, 2025, by Aryan Shrivastav, Pawar Shrikant.^^
^^Claflin University, Orangeburg, South Carolina, United States of America (USA).
^^^Georgia State University, Atlanta, USA.
^^^^Western Kentucky University, Bowling Green, Kentucky, USA.
π: Classes taught: CSCI/HNTH391/392.
Award (Start date- End date).
Professional Workshops/Hackathons/Symposiums/Certifications:
- Yale Genetics certification on machine learning for single cell analysis, (1 May, 2020), conducted by Krishnaswamy lab at Yale University, New Haven, Connecticut, USA. (https://www.krishnaswamylab.org/)^
- Southeast Regional Collaborative Access Team meeting (SER-CAT) and SE Enzyme Conference, (1 June, 2017-18), conducted by SER-CAT, Atlanta, GA, USA.^ (https://petitinstitute.gatech.edu/events/15th-ser-cat-southeast-regional-collaborative-access-team-symposium)
- Orion: Discovery Environment for HPC Research computing and Bridging XSEDE Resources workshop, (3 June, 2014, 2016), conducted by Semir Sarajlic, Dr. Neranjan Edirisinghe, Yuriy Lukinov, Michael Walters, Brock Davis, and Gregori Faroux, Atlanta, GA, USA. (https://portal.xsede.org/course-calendar/-/training-user/class/502/session/1029)^^^
- DICE – Knowledge base research solutions and python programming workshop, (1 June, 2016), conducted by Semir Sarajlic, and Dr. Neranjan Edirisinghe, Atlanta, GA, USA.^^^
- CITI (Collaborative Institutional Training Initiative) certification: Biomedical (Biomed), Responsible Conduct of Research (RCR), Health Privacy (HIPAA), Conflicts of Interest (COI), Biosafety, Information Security, IRB Members, Information Privacy Security (IPS), Public Health Research, Human Subject Protection Training, Harassment-Free Workplace, Laboratory Chemical Safety Web Based, Bloodborne Pathogens, DOT Regulatory Biomedical Waste Packaging, HepB Acknowledgement, Biosafety training (https://about.citiprogram.org/en/courses/)
- XSEDE Regional Workshop, (1 March, 2013) hosted by Florida A&M University and Florida State University, Tallahassee, Florida, USA. (https://www.xsede.org/web/xup/course-calendar/-/training-user/class/140)^^^
- Office of Academic & Professional Development workshop, (2 March, 2021), conducted by school of medicine at Yale University, New Haven, Connecticut, USA. (https://medicine.yale.edu/oapd/)^
- Yale dean’s office workshop, “Vaccine Initiatives at Yale.” (2 March, 2021), conducted by school of medicine dean’s office at Yale University, New Haven, Connecticut, USA. (https://medicine.yale.edu/about/deanoffice/workshop/)^
- “Breaking the Habit of Bias.” (2 March, 2021), conducted by Dr. Patricia Devine, University of Wisconsin-Madison, USA. (https://wff.yale.edu/news/patricia-devine-workshop-breaking-habit-bias)^^^
- KY Science Communication, Education and Advocacy Symposium. (2 March, 2021), conducted by Kentucky Academy of Science.^^ (https://www.kyscience.org/science_communication_symposiu.php)
- Single Cell Genomics Workshop, (1 March, 2021), conducted by Satija Lab at New York Genome Center, New York, USA. (https://satijalab.org/)^
- Graduate Record Examination (GRE) score, (2011): 1340/1600.
- Yale genetics faculty recruit symposia, (1 March, 2021), conducted by Department of Genetics, Yale University, Connecticut, USA.^
- Alan Alda center creating connections workshop, (1 March, 2021), “Effective scientific communication”, conducted by Department of Genetics, Yale University, New Haven, Connecticut, USA.^
- Yale Innovation Summit, (1 March, 2021), conducted by Yale University, New Haven, Connecticut, USA.^ (https://ocr.yale.edu/yale-innovation-summit-2021),
- NIH Training Program in Genetics 2021 Symposium, (1 March, 2021), conducted by Department of Genetics, Yale University, New Haven, Connecticut, USA.^
- Yale Annual Genetics Department Symposium, (1 March, 2021), conducted by Department of Genetics, Yale University, New Haven, Connecticut, USA.^
- K12 Data Science Conference and Workshop, (1 March, 2021), conducted by Georgia State University, Atlanta, USA (https://datasciconnect.com/k-12/).^^^
- Yale Systems Biology Institute and Cancer Systems Biology Symposium, (1 March, 2021), conducted by Yale University, New Haven, Connecticut, USA.^
- 2021 Tennessee Valley Corridor National Summit, (4 March, 2021), conducted by University of Tennessee, Knoxville, USA.^^
- International Data Spaces Association Summit, (4 March, 2021), conducted by IDSA.^^
- GeekCON 2021, (2 May, 2021), conducted by 4Geeks Academy.^^^ (https://4geeksacademy.com/)
- Human-Computer Interaction Lab Symposium, (1 March, 2021), conducted by University of Maryland, Baltimore, USA.^
- Milner Therapeutics Symposium, (2 March, 2021), conducted by Milner Therapeutics Institute.^^
- Cascadia R Conf, (1 March, 2021) – Workshop.^^
- Bioinformatics in Cancer Research and Therapy Symposium, (1 May, 2021), conducted by Olivia Newton-John Cancer Research Institute. (http://onjcri.org.au/)^^
- OICR-JLABS cancer symposium: Realizing the promise of cancer epigenetics, (1 May, 2021), conducted by Ontario Institute for Cancer Research (OICR) and Johnson & Johnson Innovation. (https://jlabs.jnjinnovation.com/)^^
- Latest Engineering Trends for Artificial Intelligence and Machine Learning, (1 May, 2021), conducted by UC Berkeley, California, USA Extension.^^
- Machine Learning & Data Engineering on Google Cloud, (1 May, 2021), conducted by MLAcademy.^^
- Scientists for Open Science, (1 May, 2021), Public Library of Science PLOS Journals.^^
- Applied Data Analysis in Python, (4 May, 2021), conducted by Advanced Computing Research Centre, Bristol University.^^
- Bioinformatics workshop, (4 May, 2021), conducted by Dr. Alex Feltus, Clemson University, South Carolina, USA.^^
- NYC Media Lab Summit, 4 May, 2021: Future Imperfect, conducted by NYC Media Lab, New York, USA.^^
- WaiSYMPOSIUM: Canadian Leaders in Artificial Intelligence, conducted by Women in AI Canada.^^
- Real Artificial Intelligence, 1 May, 2021, conducted by British Computer Society Specialist Group on Artificial Intelligence (BCS-SGAI). (http://bcs-sgai.org/realai2021/?section=home)^^
- Data Science Connect Conference, (1 May, 2021), conducted by Data Science Connect. (https://www.crowdcast.io/e/dscconf2021/register)^^
- Annual Yale Single Cell Symposium, (1 May, 2021), conducted by Yale Center for Biomedical Data Science, New Haven, Connecticut, USA.^.
- Inaugural Columbia Center of AI Technology Symposium, (4 May, 2021), conducted by Fu Foundation School of Engineering and Applied Science, Columbia University, New York, USA. (https://2021caitsymposium.splashthat.com/)^^
- USC Center for Body Computing 15th Annual Virtual Body Computing Conference, (4 May, 2021), conducted by University of Southern California, Los Angeles, USA.^^
- 3rd International Conference on Algorithms, Machine Learning and Signal Processing, (1 May, 2021), conducted by International Society for Applied Computing (ISAC) and The Technical Institute for Engineers (T.I.E.), (http://www.amlsp2021.net/index.html)^^
- 2021 Symposium: Applied Algorithmic Ethics, (1 May, 2021), conducted by Department of Computer Science, Marquette University, Milwaukee, Wisconsin, USA. (https://www.marquette.edu/ethics-of-big-data/)^^
- The Evolving Landscape of AI Implementation in New Drug Discovery&Develop, (2 February, 2021), conducted by Amgen.^^
- Global Analytics Conference at the University of Texas CATT, (4 February, 2021), conducted by University of Texas, Houston, USA.^^
- La Jolla Immunology Conference COVID-19 Summit, (4 February, 2021), conducted by La Jolla Immunology Center (LJIC), California, USA.^
- Sustainable Research Pathways (SRP) Workshop, (5 February, 2021), conducted by Berkeley Lab, Los Angeles, California, USA. (https://shinstitute.org/)^^
- Machine Learning for Algorithm Design, (1 February, 2021), conducted by Dr. Maria Florina Balcan, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA.^^
- Historically Black Colleges and Universities and Minority-Serving Institutions (HBCU/MI) Opportunities, Department of Defense HBCU/MI Workshop.^^
- Writing about broader impacts in NSF proposals, (1 February, 2021), funding and grantsmanship by Yale Office of Sponsored Projects, (OSP) Yale University, New Haven, Connecticut, USA.^
- BioHackathon: Cancer Transcriptomics, 1 February, 2022, by Meharry Medical College, Nashville, Tennessee, USA.^^
- Workforce competency workshop, (3 February, 2021), conducted by Kathryn M. Silva Hyde, Claflin University, Orangeburg, South Carolina, USA.^^
- Claflin University Spring, 3 February, 2022 course development, Claflin University, Orangeburg, South Carolina, USA^^ (https://www.claflin.edu/academics-research/online/online-faculty-resources).
- DeepHealth Winter School, (1 February, 2021), by The DeepHealth project.^^
- DevOps Introduction & Hands-On Workshop, (2 February, 2021), by WeCloudData.^^
- 11th edition of Data Science Bootcamp, (1 February, 2021), by IE Exponential Learning.^^
- NanoString 4th Annual Spatial Genomics Summit, (2 February, 2022), NanoString Technologies.^^
- Data Leader Summit, 3 February, 2022, by Satori.^^
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2019 Medical writing prospects by Dr. Ashley Bohn & Dr. Joshua Renfroe, Georgia State University, Atlanta, USA^^^
- Spatial Biology Workshop at ABRF, (1 February, 2022), NanoString Technologies.^^
- Institute for Health Metrics and Evaluation course, Introduction to Global Burden of Disease (GBD) (1 April, 2022): A conceptual framework, key metrics, and analytical strategies of the GBD study.^^
- An effective pedagogical package for teaching an online course, (2 April, 2022), conducted by Dr. Nicholas Panasik, Claflin University, Orangeburg, South Carolina, USA.^^
- Ernest E. Just Symposium, 1 April, 2022, by Medical University of South Carolina, Charleston, South Carolina, USA https://gradstudies.musc.edu/programs/just-symposium^^
- SCBIO 2022 Annual Conference, (2 April, 2022), conducted by South Carolina BIO.^^
- Defense Against Disinformation: Strategic Communications for Advocates, 3 April, 2022 Workshop, conducted by Union of Concerned Scientists. (https://www.ucsusa.org/)^^
- Bioinformatics Core Summer Workshops, 2 April, 2022, by Dr. Homay Valafar, SC INBRE | UofSC School of Medicine Columbia, South Carolina, USA^^ (https://www.scinbre.org/learning/bioinformatics-workshopstutorials/2022-bioinformatics-summer-workshops)
- Feature Engineering Made Simple workshop, (2 April, 2022), by Data Science Connect.^^
- Hands-on ML Workshop on Detecting Heart Diseases using Logistic Regression, 2 April, 2022, Algorizin^^
- Hands-On Deep Learning Workshop: Deploy deep learning in production, 3 April, 2022, Abacus.AI^^
- Virtual residency research computing workshop, (3 April, 2022), by Oklahoma University, Oklahoma City, USA.^^
- Information and Communication Technology (ICT) industries intellectual property (IP) hybrid thematic workshop, 3 April, 2022, by United Nations Educational, Scientific and Cultural Organization (UNESCO).^^ https://www.itu.int/net4/wsis/forum/2022/Agenda/Session/451
- Mini-symposium – Machine learning meets multi-omics for precision medicine, 4 April, 2022 by Scailyte AG^^
- Claflin University, Orangeburg, South Carolina, USA, Summer, 3 April, 2022 faculty development workshop.^^
- BioHackathon: human proteins interactions and pathway analysis of Curcumin, Praxis AI LLC, https://www.hackers.bio/^^
- Future of Healthcare Hackathon, 4 April, 2022, by Datavant.^^
- DeepSquare AI Workshop, https://deepsquare.io/^^
- Hands-on Introduction to Interpreting Machine Learning Models, 4 April, 2022, Workshop by Data Science Dojo^^
- 2022 Hands on Workshop – End to End AI/ML Platform: Predictive Modeling by Abacus.AI^^
- CCNA1-Introduction to Networks v7.0 (ITN), Cisco Networking Academy (CCNA). https://www.stanly.edu/ascitc/instructior-training-center/itc-class-schedule.html^^
- Investigating biomarkers and drug targets, Metatranscriptome analysis, annotation investigations CLC Genomics Workbench, De Novo assembly, BLAST, Genome Finishing, Single-cell RNA-seq, Single-cell ATAC-seq, Long reads sequencing
data analysis and miRNA investigation, by QIAGEN, 3 April, 2022^^ - STEM K12 Training Workshop April 2023, Claflin University, Orangeburg, South Carolina, USA^^
- 2022 Google’s Data Commons Workshop for Historically Black Colleges & Universities (HBCU) Faculty by Google^^
- 2022 National Institute of Health (NIH) Center for Scientific Review (CSR) study Mitigating Bias in Peer Review Certification^^
- 2022 National Institute of Health (NIH) Center for Scientific Review (CSR) study Review Integrity Certification^^
- 2022 HBCU C2 Kickoff & APL Swift Playgrounds 4 coding, app and Professional Development workshop^^
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2023, Best practices for writing a constructive and ethical review, by Optica Publishing Group: https://opg.optica.org/content/reviewer/^^
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OHDSI DevCon, 3 April, 2023, https://www.ohdsi.org/devcon2023/^^
- 2022 Intro to AI Observability: Monitoring ML Models & Data in Production Workshop, by WhyLabs^^
- Data Innovators Conference: Leading Edge Approaches Across Industry, by Data Science Connect^^
- Data Science Connect Conference, by Data Science Connect^^
- Demo Day Data Science Bootcamp, by IE Lifelong^^
- AWS Data Lakes & Analytics Workshop, 3 April, 2023^^
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2018: Guest Lecturer, Bharati Vidyapeeth (http://bvuniversity.edu.in/), India, Artificial Intelligence, Fuzzy logic and its applications, PPT^^
- Moodle course management system learning platform workshop at Claflin University, Orangeburg, South Carolina, USA^^
- Minority Serving-Cyberinfrastructure Consortium (MS-CC), 3 April, 2023, Claflin University, Orangeburg, South Carolina, USA^^. https://www.ms-cc.org/workshops
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Claflin University, Orangeburg, South Carolina, USA^^ Sponsored Programs and Research (SPAR) Office, Grant Management Institute. 3 April, 2023 Compliance and project management.^^
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April 3, 2023/2024 AWS Machine Learning University Bootcamp, Introduction to Machine Learning.^^ https://the-cs.org/train-aws-pd
Amazon Web Services (AWS), Machine Learning Professional Development Intensive Bootcamp Part I for Teachers https://bpb-us-w2.wpmucdn.com/campuspress.yale.edu/dist/7/3679/files/2024/01/Summer-2023-a4bc36a96ad5b076-300×212.jpeg https://bpb-us-w2.wpmucdn.com/campuspress.yale.edu/dist/7/3679/files/2023/12/Machine-Learning-Intensive-300×232.png https://campuspress.yale.edu/shrikantpawar/files/2024/03/Pawar-March-2024-AWS-Bootcamp-Part-I-Certificate-1c9070db6c2e07ab.pdf 2023-2024, The Coding School: Data Visualization, Machine Learning Models, Ethics Responsible Artificial Intelligence. https://campuspress.yale.edu/shrikantpawar/files/2024/07/pawar-July-2024-AWS-Machine-Learning-Bootcamp-Part-I-Certificate.pdf https://campuspress.yale.edu/shrikantpawar/files/2024/08/Pawar-AWS-ML-Bootcamp-Part-II-Certificate.pdf https://campuspress.yale.edu/shrikantpawar/files/2024/10/September-October-11-2024-Certificate-of-Completion-AWS-Machine-Learning-Bootcamp-Part-I-Certificate.pdf
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AWS MLU’s educator enablement program, Train the Teacher (TtT), Machine Learning Through Application. https://the-cs.org/train-aws-pd^^
- Data Preprocessing and Transformation in Machine Learning: Real World Data Use Case (WiDS Datathon, 3 April, 2024), by Kelly Hoang, Gilead Sciences.^^
- Health Tech Innovators, Google AI Hackathon, Microsoft developers AI learning, Microsoft Generative AI Hackathon^^
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May 3, 2023 South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina (ADAPT), Strategic Planning Workshop, Columbia Metropolitan Convention Center, Columbia, South Carolina, USA.^^
- Big Data Integration: Unlocking the Potential for Enhanced Epidemiological, National Heart, Lung, and Blood Institute (NHLBI) workshop^^
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April 3, 2023/2024 Amazon Web Services (AWS) Machine Learning University, Machine Learning Intensive Bootcamp (Introduction to Machine Learning Part 2): https://the-cs.org/train
^^
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Summer Undergraduate Research Experience (SURE) and SuRE-First Grantsmanship Bootcamp, by Dr. Brett Spear, University of Kentucky, College of Medicine, Lexington, USA^^
- Systematic Review and Meta-Analysis, May 4, 2024/2025, Pawar Shrikant, Westchester Academy of Medicine, Graduate Medical Education (GME) Grand Round Valhalla, New York, USA.^^ Mvhealthsystem-Presentation, Video
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May 3, 2023 2024 WiDS Upskill Workshop, Climate Change and Cancer, Dr. Leticia Nogueira Scientific Director, American Cancer Society^^
- May 3, 2024 Big Data and Machine Leaning workshop, Extreme Scale Engineering and Discovery Environment (XSEDE)^^
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May 2, 2024 Data Driven Decision Making: A Python Based Machine Learning, soft computing research society (SCRS)^^
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May 1, 2024 Claflin AI Faculty Development Workshop, Enhancing Teaching and Learning at Claflin through Artificial Intelligence, Claflin University, Orangeburg, South Carolina, USA^^
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May 5, 2024 AI workshop to build a neural network with pytorch lightning, by Janani Ravi, Google Cloud Architect and Data Engineer^^
Seminars Attended:
- Bioactive and bioadhensive nanomedicine for cancer therapy, Dr. Welli Yan, Georgia State University, Atlanta, USA, June 3, 2014^^^
- Development of liver cancer vaccines – preclinical studies, Dr. Yukai He, Georgia Research University, Atlanta, USA ,June 3, 2014^^^
- Bidirectional communication between the brain and adipose tissue, Dr. Timothy. Bartness, Georgia State University, Atlanta, USA, June 4, 2014^^^
- Composition and assembly of the outer spore layers of Bacillus anthracis: The more we learn, the less we know, Dr. George Stewart, University of Missouri, Columbia, USA June 5, 2014^^^
- New targets and mechanisms for controlling Herpes Simplex Virus, Dr. Deepak Shukla, University of Chicago, USA, June 4, 2014^^^
- Gut Microbiota, low-grade inflammation, and metabolic syndrome, Dr. Andrew Gewirtz, Georgia State University, Atlanta, USA, June 5, 2014^^^
- The Wiring Diagram for Hunger: Using Neuron-Specific Tools to Discover its Basis, Dr. Bradford B. Lowell, Harvard Medical School, Cambridge, USA, June 2, 2014^^^
- Dendritic release of neuropeptides: A novel form of interpopulation communication in the hypothalamus, Dr. Javier Stern, Georgia Research University, Atlanta, USA, June, 6, 2014^^^
- Stress responses in Bacillus subtilis, Dr. John Helmann, Cornell University, Ithaca, USA June 7, 2014^^^
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Introduction to Global Burden of Disease (GBD): analytical methods, data sources, visualization tools, and policy implications: https://www.healthdata.org/research-analysis/training^^
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RNA-seq analysis in Ingenuity Pathway Analysis (IPA): https://digitalinsights.qiagen.com/ipa-training/^^
- Synapses to Satiation: Control of food intake through modulation of central vagal afferent endings, Dr. Robert Ritter, Washington State University, USA, June 7, 2014^^^
- Multi-color and viral tools for mapping the zebrafish brain, Dr. Albert Pan, Georgia Research University, Atlanta, USA, June 5, 2014^^^
- Dopamine neuron activity and the neural control of feeding and body weight, Dr. Aron. Roseberry, Georgia State University, Atlanta, USA, June 3, 2014^^^
- Respiratory microbiota and transmission of respiratory pathogens, Dr. Eric Harvill, Pennsylvania State University, USA, June 2, 2014^^^
- Nanosized vectors for liver targeting strategy, Dr. Hameed. Laroui, Georgia Research University, Atlanta, USA, June 6, 2014^^^
- A multiscale paradigm shift to win the arms race against TB, Dr. Nitin Baliga, Institute of Systems Biology, Washington, USA, June 7, 2015^^^
- Nicotinamide Riboside as a Tool to Understand Yeast Lifespan and Vertebrate Fat Utilization, Dr. Charles Brenner, University of Iowa, Iowa City, USA, May 7, 2012^^^
- The Evolutionary Synthesis: Then and Now, Dr. Will B. Provine, Cornell University, Ithaca, New York, USA, June 7, 2012^^^
- Optimal Brain Health Throughout the Lifespan: How, Why, and Why Not, Dr. Mark Mattson, NIH, National Institute of Health NIH, Bethesda, Maryland, USA, June 9, 2012^^^
- Auditory cortical responses to spectrally degraded sounds: Human intracranial electrophysiology studies, Dr. Kirill Nourski, University of Iowa, Iowa City, USA, June 8, 2012^^^
- Innate immune responses to Leishmania, Dr. Mary Wilson, University of Iowa, Iowa City, USA, June 3, 2012^^^
- The molecular and cellular basis of embryonic morphogenesis, Dr. John Wallingford, University of Texas, Houston, USA, May 2, 2012^^^
- Mechanisms that regulate meiotic development, Dr. Ed Winter, Thomas Jefferson University, Philadelphia, Pennsylvania, USA, May 1, 2012^^^
- Generation of human neurons by microRNA-mediated reprogramming of fibroblasts, Dr. Andrew Yoo, Washington University, USA, May 6, 2012^^^
- Impact of whole genome duplications on evolution in the mustard family, Dr. J. Chris Pires, University of Missouri, Saint Louis, USA, May 2012^^^
- Mechanisms underlying the diversification of life histories, Dr. Dan Hahn, University of Florida, Gainesville, USA, May 2, 2012^^^
- Using molecular markers to investigate invasive Rubus and genetic diversity of Dr. Miscanthus, Lindsay Clark, University of Illinois, Chicago, USA, May 3, 2012^^^
- Retrospective stable isotope analysis reveals ecosystem-wide effects of river regulation over the last century, Dr. Tom Turner, University of New Mexico, USA, May 7, 2012^^^
- Purine ring catabolism in nitrogen mobilization, Dr. Claus Peter Witte, Free University of Berlin, Germany, May 8, 2012^^^
- COVID community action summit (C-CAS), (https://necsi.edu/c-cas), New England Complex Systems Institute, May 1, 2020^
- Global Burden of Disease (GBD) consultations on congenital heart diseases, COVID-19, mortality, child growth, thyroid disease, heart failure, NO2 pollution, and road injuries, The Institute for Health Metrics and Evaluation (IHME), (http://www.healthdata.org/), University of Washington, USA June 4, 2020^
- Biology at true resolution (https://medicine.yale.edu/event/60563/), Yale Center for Genome Analysis and 10X Genomics, May 1, 2019^
- Single-cell sequencing solutions, Michael Smith, 10X Genomics and Yale Stem Cell Core, May 1, 2019^
- Transcriptional regulatory network of T-cell controlling type I interferon response in COVID-19, Dr. Tomokazu Sumida, Yale School of Medicine, New Haven, Connecticut, USA, May 1, 2021^^
- ACM Learning from Data: The Two Cultures, Dr. Adji Bousso Dieng, Princeton University, New Jersey USA, May 1, 2021^^
- National Institute of Allergy and Infectious Diseases (NIAID), Human Immunology Project Consortium (HIPC) Annual Meeting, May 2021^
- COVID-19 in children, Dr. Kevan Herold, Yale School of Medicine, New Haven, Connecticut, USA, May 3, 2021^
- Human Inspired Artificial Intelligence (https://on.acm.org/t/human-inspired-artificial-intelligence/2131), Manish Gupta, ACM Fellow and Director of Google Research India, May 1, 2021^^
- Streamlining Data Sharing in a Global HIV Research Consortium (https://www.niaid.nih.gov/research/data-science-seminar), National Institute of Allergy and Infectious Diseases (NIAID), May 2021^^
- AI3SD Autumn Seminar IV: AI & ML 4 Drugs & Materials, AI3 Science Discovery Network (AI3SD), May 1, 2021^^
- Machine learning can identify newly diagnosed patients with CLL at high risk of infection, Carsten Utoft Niemann, Cambridge Centre for AI In Medicine, May 1, 2021^^
- Autonomous Materials Research and Discovery, Dr. Aaron Gilad Kusne, Data Science Institute, Columbia University, New York, USA, May 1, 2021^^
- AI: Beyond the BlackBox, Prag Sharma, Artificial Intelligence Centre of Excellence (“AI CoE”), Citi, May 2021^^
- Deep representation learning for exploration and inference in biomedical data, Dr. Smita Krishnaswamy, Yale University, New Haven, Connecticut, USA, May 1, 2021^
- ACM Quantum Computational Supremacy, Dr. Scott Aaronson, University of Texas at Austin, USA, May 2021^^
- Designing for Data Privacy, Data Science Connect, May 1, 2021^^
- Probabilistic Machine Learning and Artificial Intelligence, The Royal Society, April 4, 2021^^
- AI-day of Centre for Artificial Intelligence, University of Wollongong, April 2, 2021^^
- AI in Health – BioBridge Workshop, April 2, 2021^^
- Cambridge Centre for AI in Medicine’s Open House, Cambridge Centre for AI in Medicine, April 2, 2021^^
- Next-Generation Tools and Resources for Next-Generation Immunogenetic Data, Dr. Jill A. Hollenbach, University of California, San Francisco, USA, April 1, 2021^^
- TMLS2021 Workshop: Data Shift and Model Adaptation in Machine Learning, Toronto Machine Learning Society (TMLS), April 1, 2021^^
- Radiological Society of North America (RSNA) Annual Conference, April 1, 2021. https://rsna2021.rsna.org/^^
- Convergence of AI, Blockchain and IoT, April 3, 2021, by Aicorespot^^
- AI in Healthcare April 2021, by Aicorespot^^
- Application of Machine Learning to Stroke Research, April 7, 2022, by Dr. Iván Díaz, Weill Cornell Medical College, New York, USA^^
- AI-2021 Forty-first SGAI International Conference, April 1, 2021, by BCS, The Chartered Institute for IT. http://www.bcs-sgai.org/^^
- Harvard T Chan Center for Communicable Disease Dynamics Seminar Series, April 4, 2022. https://ccdd.hsph.harvard.edu/^^
- Artificial Intelligence Solutions for Reliable Epidemic Forecasting, April 9, 2022, by Dr. Lijing Wang, Boston Children’s Hospital and Harvard Medical School, Cambridge, USA.^^
- AWS Innovate: Data and AL/ML edition conference, April 9, 2023.^^
- Sex Differences in Altered Neural Responses and in Prediction of Future Relapse in Individuals with Substance Use Disorder, April 1, 2022, by Dr. Keisha Smith, Yale Stress Center, Yale School of Medicine, New Haven, Connecticut, USA^^
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DSC COLLIDE Data Conference, May 2, 2023 by Data Science Connect^^
- Addressing assumption uncertainty in models of vector-borne disease epidemiology, May 7, 2022, by Dr. Alex Perkins, University of Notre Dame, Indiana, USA^^
- Data Innovators Conference: Leading Edge Approaches Across Industry, by Data Science Connect, May 1, 2022.^^
- Data Science Day May 8, 2022, by Data Science Institute, Columbia University, New York, USA.^^ https://datascience.columbia.edu/event/data-science-day-2022/
- AI in Medicine and Healthcare: Hype, Promise, Reality and Pitfalls, May 1, 2022, by New England Healthcare Executive Network^^
- AWS Awesome Conference, May 9, 2022. https://aws.amazon.com/events/awsome-day/americas/^^
- Virtual NIH Grants Conference, May 2, 2022. NIH. https://grants.nih.gov/learning-center/conference^^
- Facial Recognition Technology in Healthcare: Interdisciplinary Perspective, May 3, 2022, by Institute of Health Policy Management and Evaluation (IHPME) at University of Toronto.^^
- May 8, 2023 Advancing Spatial Biology Workflows, illumina^^
- United States Agency for International Development (USAID), Amplifying HBCUs and Black Voices in Development: Hybrid Conference and Career Expo, https://usaid-hbcu.conference.tc/^^
- A Framework for Modeling Complex Human Behaviors in Epidemic Simulations, June 5, 2022, by Dr. Samarth Swarup, Biocomplexity Institute, University of Virginia, Charlottesville, USA^^.
- Advances in Data Science and AI Conference, June 5, 2022, by Digital Futures^^
- Pancreatic Cancer clinical studies, by Dr. Bristi Basu, Department of Oncology, University of Cambridge. Milner Therapeutics Institute^^
- Empowering impactful science with leading-edge single cell, spatial, and in situ technologies, June 3, 2023, AGBT 10X Genomics workshop^^
- NVIDIA GTC Conference, https://www.nvidia.com/gtc/^^
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2023 Amazon Web Services (AWS) Machine Learning University (MLU) Educator Enablement Program: Ethics Responsible artificial intelligence (AI), by Mia Mayer; Auto Machine Learning, by Cem Sazara; Deep Learning, by Jose Cassio dos Santos Jr; Non-Anthropomorphic Language for Talking about Large Language Models (LLMs), by Brent Werness, AWS MLU; The Future of Generative AI in Education – Milan McGraw, City College of Chicago, Illinois, USA; Machine Learning: Bridging Education to Career, by Dr. Michael Soltys, California State University Channel Islands, California, USA^^
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June 2, 2023 Ampere Developer Summit for cloud architectural migration.^^
- June 1, 2023 Responsible AI, by Mia Mayer, AWS MLU Educator Enablement Program.^^
- June 7, 2023 Auto Machine Learning, by Cem Sazara, AWS MLU Educator Enablement Program.^^
- June 1, 2024 New Jersey Institute of Technology (NJIT), Institute for Data Science, Resilient and (Near)-Optimal Algorithms for Reinforcement Learning and Nonconvex Optimization, by Dr. Yi Zhou, Assistant Professor, University of Utah, USA.^^
- June 8, 2023 Deep Learning by Jose Cassio dos Santos Jr., AWS MLU Educator Enablement Program.^^
- AI and Machine Learning Education Series: Introduction to ML, Computer Vision, MONAI, & Containers by Medical University of South Carolina (MUSC) Charleston, USA^^
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June 1, 2023 dockercon: https://www.dockercon.com/2023/home?i=v5RSY9s1zBVHYoQpdnecRLPd4Q62PJlW^^
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SelectScience Cancer Research Summit, June 3, 2023: https://cancer-research-summit-2023.vfairs.com/en/^^
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May 1 and November 8, 2023/2024 BTEC591, Machine learning techniques for analyzing and interpreting genomics & proteomics data, Pawar Shrikant, Claflin University, Orangeburg, South Carolina, USA^^
Research-Seminar-Presentation video
- June 2, 2023 Global incidence, prevalence, years lived with disability (YLDs), disability-adjusted life-years (DALYs), and healthy life expectancy (HALE), by Dr. Schumacher, Dr. Naghavi, Dr. Ferrari, The Institute for Health Metrics and Evaluation (IHME), Washington University, USA^^
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National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), RII Track-1 Award, AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina,
ADAPT: Diffusion Model for Image Generation, by Dr. Feng Luo, Clemson University, South Carolina, USA.^^
- CMU TechBridge Coding Bootcamp, by Dr. David Kosbie, Carnegie Mellon University, Pittsburg, Pennsylvania, USA.^^
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National Science Foundation South Carolina Established Program for Stem Cooperative Research (SC EPSCoR), RII Track-1 Award, AI-enabled Devices for the Advancement of Personalized and Transformative Healthcare in South Carolina, ADAPT: A Bayesian Network Approach for Causal Discovery, by Dr. Ivan Dungan, Francis Marion University, Florence, South Carolina, USA.^^
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Business Development 101 by Nucleate, Genentech, and Alnylam.^^
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October 7, 2024 Amazon Web Services AWS Skill Builder, Building Generative artificial intelligence Applications Using Amazon Bedrock ID: E-02ZM3J^^
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Introduction to Retrieval Augmented Generation, Abhinav Kimothi, Association for Computing Machinery (ACM), Learning Center, October 2, 2024^^
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Infrastructure Security – The Backbone of the Digital World, by Mike Bullard Leader,October 7, 2024, Cisco^^
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Pearson ED.tech Symposium October 1, 2024, by Dr. Ethan Mollick, Wharton School of the University of Pennsylvania, USA^^
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Science Gateways 2024 Annual Conference (SGX3), Geoweaver: A Science Gateway for Reproducible and Scalable Disease Prediction Research Using Deep Learning, (October 7, 2024), by Dr. Ziheng Sun, Center for Spatial Information Science and Systems, George Mason University, Fairfax, Virginia, USA.^^
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Science Gateways 2024 Annual Conference (SGX3), (October 7, 2024), projectEureka A Gateway for Cloud and K8s HPC & AI Bursting, by Boyd Wilson.^^
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Sponsored Programs and Research (SPAR) Office, Research, Scholarship, and Creative Expression (RSCE) Day, (February 21, 2024), Claflin University, Orangeburg, South Carolina, USA.^^
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Science Gateways 2024 Annual Conference (SGX3), (October 7, 2024), Tapis Machine Learning Hub Service for Science Gateways, Anagha Jamthe.^^
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Science Gateways 2024 Annual Conference (SGX3), (October 7, 2024), Implementing Reproducible Cookbook Environments for Advanced Analyses on Science Gateways, by Faust, Pierce.^^
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Genomic Data Science Community Network (GDSCN) Symposium, November 10, 2024.^^
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The State of AI in Drug Discovery, October 30, 2024, by Dr. David Baker, University of Washington/Howard Hughes Medical Institute (HHMI), Seattle, USA^^^.
- Devices and Diagnostics – Regulatory Strategy, November 20, 2024, by The Blavatnik Fund, Yale’s innovation and entrepreneurship community, New Haven, Connecticut, USA.^^
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Product Management in the AI Era, by Christine Robson, Product Manager Director for AI Data at Google, November 14, 2024.^^
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Global HealthTech Summit, Navigating the AI Revolution in Healthcare, November 10, 2024.^^
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Human Reference Pangenome: A Population-Inclusive Bioinformatics Pipeline, January 20, 2025, by Carlos Alfaro Quinde, Big Data Health Science Center, Arnold School of Public Health, University of South Carolina, Columbia, South Carolina, USA.^^
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November 21, 2024 Machine learning techniques for analyzing and interpreting genomics and proteomics data, Pawar Shrikant (Claflin University, South Carolina, USA), Clemson University, South Carolina, USA, MICR 8000 – Concepts in AI in Microbiology Presentation video.^^