Software

Patch Tracking Tools

ImageJ plugins and macros for patch tracking and quality control for quantitative fluorescence microscopy.

Download the latest version of PatchTrackingTools (version 2015.12.16) with a documentation

Download a sample movie and its analysis with PatchTrackingTools (~60 Mo)

If you have any issues or find glitches please contact Julien Berro (julien.berro@yale.edu)

Please cite: Berro J, Pollard TD. Mol Biol Cell. 2014 Nov 5;25(22):3515-27. Synergies between Aip1p and capping protein subunits (Acp1p and Acp2p) in clathrin-mediated endocytosis and cell polarization in fission yeast. PMID: 25143407

Older versions: PatchTrackingTools.2015.12.08.zip, PatchTrackingTools.2015.06.01.zip, PatchTrackingTools.2014.05.25.zip

 

S. pombe Profiling Tools

ImageJ macros for cell profiling and montages for quantitative fluorescence microscopy.

Download (includes a documentation):

PombeProfilingTools.2012.12.09.zip

 

Temporal Super-Resolution realignment

Simple Matlab demo of the temporal super-resolution realignment method:

DemoTemporalSuperResolution.zip